RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 MANSC4A6NHS7 340 aaPredicted RBP11.6□□□□□ -0.55
PDPN-204ENST00000475043 SPTY2D1Q68D10 685 aaPredicted RBP11.6□□□□□ -0.55
PDPN-204ENST00000475043 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
PDPN-204ENST00000475043 SPATA5Q8NB90 893 aa11.6□□□□□ -0.55
PDPN-204ENST00000475043 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
PDPN-204ENST00000475043 OPTNQ96CV9 577 aa11.6□□□□□ -0.55
PDPN-204ENST00000475043 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
PDPN-204ENST00000475043 RCAN3Q9UKA8 241 aa11.6□□□□□ -0.55
PDPN-204ENST00000475043 CSADQ9Y600 493 aa11.6□□□□□ -0.55
PDPN-204ENST00000475043 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
PDPN-204ENST00000475043 UQCRFS1P1P0C7P4 283 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 INHBEP58166 350 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 MAP3K9P80192 1104 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 TTC39AQ5SRH9 613 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 DCAF15Q66K64 600 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 PI16Q6UXB8 463 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.59□□□□□ -0.55
PDPN-204ENST00000475043 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
PDPN-204ENST00000475043 RPAP1Q9BWH6 1393 aaPredicted RBP11.58□□□□□ -0.56
PDPN-204ENST00000475043 CCDC85CA6NKD9 419 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 ALDH1A1P00352 501 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
PDPN-204ENST00000475043 GJA5P36382 358 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 MECOMQ03112 1051 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 NFIAQ12857 509 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 VGLL4Q14135 290 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 CCDC158Q5M9N0 1113 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 CEP85Q6P2H3 762 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.58□□□□□ -0.56
PDPN-204ENST00000475043 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 DBNDD2Q9BQY9 259 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 GPR108Q9NPR9 543 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 DOCK2Q92608 1830 aa11.58□□□□□ -0.56
PDPN-204ENST00000475043 MCAMP43121 646 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 BTDP43251 543 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 OTUD7BQ6GQQ9 843 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 ZSCAN29Q8IWY8 852 aaPredicted RBP11.57□□□□□ -0.56
PDPN-204ENST00000475043 ZNF296Q8WUU4 475 aaPredicted RBP11.57□□□□□ -0.56
PDPN-204ENST00000475043 ZKSCAN4Q969J2 545 aaPredicted RBP11.57□□□□□ -0.56
PDPN-204ENST00000475043 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 RAI14Q9P0K7 980 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 LRP2BPQ9P2M1 347 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 FAM198AQ9UFP1 575 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 DDX19BQ9UMR2 479 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 EXOC6BQ9Y2D4 811 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 NOP58Q9Y2X3 529 aaKnown RBP11.57□□□□□ -0.56
PDPN-204ENST00000475043 MROH7-TTC4A0A0A0MT08 1334 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 GAKO14976 1311 aa11.57□□□□□ -0.56
PDPN-204ENST00000475043 GPR25O00155 361 aa11.56□□□□□ -0.56
PDPN-204ENST00000475043 IGF2BP3O00425 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
PDPN-204ENST00000475043 LDHCP07864 332 aa11.56□□□□□ -0.56
PDPN-204ENST00000475043 RGS3P49796 1198 aa11.56□□□□□ -0.56
PDPN-204ENST00000475043 GSTO1P78417 241 aa11.56□□□□□ -0.56
PDPN-204ENST00000475043 PICALMQ13492 652 aa11.56□□□□□ -0.56
PDPN-204ENST00000475043 ZNF341Q9BYN7 854 aa11.56□□□□□ -0.56
PDPN-204ENST00000475043 CCDC8Q9H0W5 538 aaPredicted RBP11.56□□□□□ -0.56
PDPN-204ENST00000475043 BCL11AQ9H165 835 aa11.56□□□□□ -0.56
PDPN-204ENST00000475043 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
PDPN-204ENST00000475043 MAST2Q6P0Q8 1798 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 APBB1O00213 710 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 CTU1Q7Z7A3 348 aaKnown RBP11.55□□□□□ -0.56
PDPN-204ENST00000475043 ERO1BQ86YB8 467 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 ZFPM1Q8IX07 1006 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 NSUN4Q96CB9 384 aaKnown RBP11.55□□□□□ -0.56
PDPN-204ENST00000475043 NOL10Q9BSC4 688 aaKnown RBP11.55□□□□□ -0.56
PDPN-204ENST00000475043 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 R3HDMLQ9H3Y0 253 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 CHMP4BQ9H444 224 aaKnown RBP11.55□□□□□ -0.56
PDPN-204ENST00000475043 DBNLQ9UJU6 430 aaKnown RBP11.55□□□□□ -0.56
PDPN-204ENST00000475043 SNCAIPQ9Y6H5 919 aa11.55□□□□□ -0.56
PDPN-204ENST00000475043 GPR75-ASB3A0A0A6YYF3 556 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 CCL15-CCL14A0A0B4J2E2 113 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 SPDYE5A6NIY4 337 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 ST18O60284 1047 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 FKTNO75072 461 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 HMMRO75330 724 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 ENTPD3O75355 529 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 INPP5BP32019 993 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 GTF2A2P52657 109 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 CCL15Q16663 113 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
PDPN-204ENST00000475043 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.54□□□□□ -0.56
PDPN-204ENST00000475043 ZNF384Q8TF68 577 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 EAF2Q96CJ1 260 aaPredicted RBP11.54□□□□□ -0.56
PDPN-204ENST00000475043 PTPN18Q99952 460 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 CFHR5Q9BXR6 569 aa11.54□□□□□ -0.56
PDPN-204ENST00000475043 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
PDPN-204ENST00000475043 TESPA1A2RU30 521 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms