RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ALKBH2Q6NS38 261 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 PRR23BQ6ZRT6 265 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 LCNL1Q6ZST4 164 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 TTLL10Q6ZVT0 673 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 CYFIP1Q7L576 1253 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 FBXO15Q8NCQ5 510 aaPredicted RBP1.94□□□□□ -2.1
HDAC9-222ENST00000474742 FLAD1Q8NFF5 587 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 SNX29Q8TEQ0 813 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 ASB11Q8WXH4 323 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 KIRREL1Q96J84 757 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 FAM129BQ96TA1 746 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 TRAIPQ9BWF2 469 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 ZC3H12CQ9C0D7 883 aaKnown RBP1.94□□□□□ -2.1
HDAC9-222ENST00000474742 BHLHE41Q9C0J9 482 aaPredicted RBP1.94□□□□□ -2.1
HDAC9-222ENST00000474742 ATXN3LQ9H3M9 355 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 NSUN3Q9H649 340 aaKnown RBP1.94□□□□□ -2.1
HDAC9-222ENST00000474742 PICK1Q9NRD5 415 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.94□□□□□ -2.1
HDAC9-222ENST00000474742 AMOTL2Q9Y2J4 779 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 ZNF503-AS2A6NEH8 195 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 GNAT3A8MTJ3 354 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 KRTAP9-7A8MTY7 169 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 NUAK1O60285 661 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 GLI1P08151 1106 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 LIG1P18858 919 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 USP5P45974 858 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 EHHADHQ08426 723 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 AP3B2Q13367 1082 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 ZNF423Q2M1K9 1284 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 LCE5AQ5TCM9 118 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 ATG14Q6ZNE5 492 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 GLYCTKQ8IVS8 523 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.93□□□□□ -2.1
HDAC9-222ENST00000474742 SMYD4Q8IYR2 804 aaPredicted RBP1.93□□□□□ -2.1
HDAC9-222ENST00000474742 TOP6BLQ8N6T0 577 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 RELTQ969Z4 430 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 CSRNP1Q96S65 589 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 SETDB2Q96T68 719 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 ZCCHC4Q9H5U6 513 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 LIN7BQ9HAP6 207 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 ZFYVE28Q9HCC9 887 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 DCP1AQ9NPI6 582 aaPredicted RBP1.93□□□□□ -2.1
HDAC9-222ENST00000474742 CRIM1Q9NZV1 1036 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 GTF2IRD1Q9UHL9 959 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 PCOLCE2Q9UKZ9 415 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 IVNS1ABPQ9Y6Y0 642 aa1.93□□□□□ -2.1
HDAC9-222ENST00000474742 FAM155AB1AL88 458 aaPredicted RBP1.92□□□□□ -2.1
HDAC9-222ENST00000474742 LEFTY1O75610 366 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 NEFLP07196 543 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 CTSBP07858 339 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 HCLS1P14317 486 aaPredicted RBP1.92□□□□□ -2.1
HDAC9-222ENST00000474742 RAC2P15153 192 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 ID3Q02535 119 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 DSC3Q14574 896 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 KCNA10Q16322 511 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 SPRED3Q2MJR0 410 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 FYB2Q5VWT5 728 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 ERICH6BQ5W0A0 696 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 TMEM132EQ6IEE7 984 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 PI16Q6UXB8 463 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 SEZ6L2Q6UXD5 910 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 DBX2Q6ZNG2 339 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 TMC7Q7Z402 723 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 KCNN1Q92952 543 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 CCDC120Q96HB5 630 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 TCF12Q99081 682 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 WDR18Q9BV38 432 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 NIF3L1Q9GZT8 377 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 EHD4Q9H223 541 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 EPB41L4BQ9H329 900 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 MKNK2Q9HBH9 465 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 RNF19AQ9NV58 838 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 RAPGEFL1Q9UHV5 662 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 CTNND2Q9UQB3 1225 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 SNX11Q9Y5W9 270 aa1.92□□□□□ -2.1
HDAC9-222ENST00000474742 A0A1W2PP55 124 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 ECEL1O95672 775 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 BMP7P18075 431 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 GRIA4P48058 902 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 ZNF157P51786 506 aaPredicted RBP1.91□□□□□ -2.1
HDAC9-222ENST00000474742 OXCT1P55809 520 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 TTLL4Q14679 1199 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 B4GALNT3Q6L9W6 998 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 CDC37L1Q7L3B6 337 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 AMIGO3Q86WK7 504 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 C1QL4Q86Z23 238 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 WFDC3Q8IUB2 231 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 GALNT12Q8IXK2 581 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 EPS8L3Q8TE67 593 aaKnown RBP1.91□□□□□ -2.1
HDAC9-222ENST00000474742 KCNB2Q92953 911 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 ACSBG1Q96GR2 724 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 FANCD2OSQ96PS1 177 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 TRIM56Q9BRZ2 755 aaKnown RBP1.91□□□□□ -2.1
HDAC9-222ENST00000474742 DUSP23Q9BVJ7 150 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 RBCK1Q9BYM8 510 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 NRSN2Q9GZP1 204 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 IRF2BPLQ9H1B7 796 aa1.91□□□□□ -2.1
HDAC9-222ENST00000474742 GSX1Q9H4S2 264 aaPredicted RBP1.91□□□□□ -2.1
HDAC9-222ENST00000474742 CARS2Q9HA77 564 aaKnown RBP1.91□□□□□ -2.1
HDAC9-222ENST00000474742 BRPF3Q9ULD4 1205 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms