RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 GRIPAP1Q4V328 841 aa23.27■■□□□ 1.32
SSR1-204ENST00000474597 TMEM67Q5HYA8 995 aa23.27■■□□□ 1.32
SSR1-204ENST00000474597 LARP1BQ659C4 914 aaKnown RBP23.27■■□□□ 1.32
SSR1-204ENST00000474597 AMOTL1Q8IY63 956 aa23.27■■□□□ 1.32
SSR1-204ENST00000474597 ESR2Q92731 530 aa23.27■■□□□ 1.32
SSR1-204ENST00000474597 FAM163AQ96GL9 167 aaPredicted RBP23.27■■□□□ 1.32
SSR1-204ENST00000474597 ERICH2A1L162 156 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 IFIT3O14879 490 aaKnown RBP23.26■■□□□ 1.31
SSR1-204ENST00000474597 DTNBO60941 627 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 NFXL1Q6ZNB6 911 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 MTFR1LQ9H019 292 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 MCM9Q9NXL9 1143 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 ATF5Q9Y2D1 282 aaPredicted RBP23.26■■□□□ 1.31
SSR1-204ENST00000474597 TACC3Q9Y6A5 838 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 GPR75-ASB3A0A0A6YYF3 556 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 ZSCAN22P10073 491 aaPredicted RBP23.26■■□□□ 1.31
SSR1-204ENST00000474597 DPEP1P16444 411 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 SBK1Q52WX2 424 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 ILDR1Q86SU0 546 aaPredicted RBP23.26■■□□□ 1.31
SSR1-204ENST00000474597 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
SSR1-204ENST00000474597 NAV1Q8NEY1 1877 aa23.25■■□□□ 1.31
SSR1-204ENST00000474597 DHX16O60231 1041 aaKnown RBP23.25■■□□□ 1.31
SSR1-204ENST00000474597 CCDC93Q567U6 631 aa23.25■■□□□ 1.31
SSR1-204ENST00000474597 MCTP1Q6DN14 999 aa23.25■■□□□ 1.31
SSR1-204ENST00000474597 FAM184AQ8NB25 1140 aa23.25■■□□□ 1.31
SSR1-204ENST00000474597 NKX2-3Q8TAU0 364 aa23.25■■□□□ 1.31
SSR1-204ENST00000474597 F8W031 263 aaPredicted RBP23.24■■□□□ 1.31
SSR1-204ENST00000474597 ECE2O60344 883 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 JAK2O60674 1132 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 HMGN5P82970 282 aaKnown RBP23.24■■□□□ 1.31
SSR1-204ENST00000474597 IGDCC4Q8TDY8 1250 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 TGFBRAP1Q8WUH2 860 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 MTA3Q9BTC8 594 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 NCOA5Q9HCD5 579 aaKnown RBP23.24■■□□□ 1.31
SSR1-204ENST00000474597 TTF2Q9UNY4 1162 aaKnown RBP23.24■■□□□ 1.31
SSR1-204ENST00000474597 KIF3AQ9Y496 699 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 GAKO14976 1311 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 VPS37CA5D8V6 355 aaPredicted RBP23.24■■□□□ 1.31
SSR1-204ENST00000474597 AOC3Q16853 763 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 TEX11Q8IYF3 940 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 RTKN2Q8IZC4 609 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 UBAC1Q9BSL1 405 aa23.24■■□□□ 1.31
SSR1-204ENST00000474597 CDK5RAP2Q96SN8 1893 aa23.23■■□□□ 1.31
SSR1-204ENST00000474597 CCDC69A6NI79 296 aa23.23■■□□□ 1.31
SSR1-204ENST00000474597 LIFRP42702 1097 aa23.23■■□□□ 1.31
SSR1-204ENST00000474597 NSUN7Q8NE18 718 aaKnown RBP23.23■■□□□ 1.31
SSR1-204ENST00000474597 SMARCC2Q8TAQ2 1214 aa23.23■■□□□ 1.31
SSR1-204ENST00000474597 LY9Q9HBG7 655 aa23.23■■□□□ 1.31
SSR1-204ENST00000474597 TGFB2P61812 414 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 PDE4BQ07343 736 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 KIAA2012Q0VF49 1180 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 WTAPQ15007 396 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 R3HDM1Q15032 1099 aaKnown RBP23.22■■□□□ 1.31
SSR1-204ENST00000474597 SYNE3Q6ZMZ3 975 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 CERS5Q8N5B7 392 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 DDX11Q96FC9 970 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 ATP6V1DQ9Y5K8 247 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 SNED1Q8TER0 1413 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 PTPDC1A2A3K4 754 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 CPLX1O14810 134 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 PPIP5K2O43314 1243 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 F13A1P00488 732 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 USP17L8P0C7I0 530 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 KCNA3P22001 575 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 STRIP1Q5VSL9 837 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 SGMS1Q86VZ5 419 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 TMTC2Q8N394 836 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 MTMR6Q9Y217 621 aa23.22■■□□□ 1.31
SSR1-204ENST00000474597 RANBP6O60518 1105 aaKnown RBP23.21■■□□□ 1.31
SSR1-204ENST00000474597 MAPKAPK5Q8IW41 473 aa23.21■■□□□ 1.31
SSR1-204ENST00000474597 ZKSCAN3Q9BRR0 538 aa23.21■■□□□ 1.31
SSR1-204ENST00000474597 MXD3Q9BW11 206 aa23.21■■□□□ 1.31
SSR1-204ENST00000474597 MKRN1Q9UHC7 482 aaKnown RBP23.21■■□□□ 1.31
SSR1-204ENST00000474597 DAGLAQ9Y4D2 1042 aa23.21■■□□□ 1.31
SSR1-204ENST00000474597 SMIM22K7EJ46 135 aa23.2■■□□□ 1.3
SSR1-204ENST00000474597 POLR3DP05423 398 aaPredicted RBP23.2■■□□□ 1.3
SSR1-204ENST00000474597 FGRP09769 529 aa23.2■■□□□ 1.3
SSR1-204ENST00000474597 CYP2D6P10635 497 aa23.2■■□□□ 1.3
SSR1-204ENST00000474597 METAP2P50579 478 aaKnown RBP eCLIP23.2■■□□□ 1.3
SSR1-204ENST00000474597 FKBP1AP62942 108 aaKnown RBP23.2■■□□□ 1.3
SSR1-204ENST00000474597 APOA5Q6Q788 366 aa23.2■■□□□ 1.3
SSR1-204ENST00000474597 RAB11FIP4Q86YS3 637 aa23.2■■□□□ 1.3
SSR1-204ENST00000474597 HPS5Q9UPZ3 1129 aa23.2■■□□□ 1.3
SSR1-204ENST00000474597 SLC12A7Q9Y666 1083 aa23.2■■□□□ 1.3
SSR1-204ENST00000474597 USP17L3A6NCW0 530 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 USP17L4A6NCW7 530 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 ZBTB43O43298 467 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 PRDM1O75626 825 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 CTDNEP1O95476 244 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 USP17L1Q7RTZ2 530 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 IQCA1Q86XH1 822 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 ORC4O43929 436 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 TRAK2O60296 914 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 SLC4A8Q2Y0W8 1093 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 SOGA3Q5TF21 947 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 C12orf60Q5U649 245 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 CPLX2Q6PUV4 134 aaKnown RBP23.19■■□□□ 1.3
SSR1-204ENST00000474597 TEKT1Q969V4 418 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 KCNQ5Q9NR82 932 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms