RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
RPGR-206ENST00000474584 IGDCC4Q8TDY8 1250 aa16.2■□□□□ 0.18
RPGR-206ENST00000474584 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.2■□□□□ 0.18
RPGR-206ENST00000474584 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
RPGR-206ENST00000474584 LRP6O75581 1613 aa16.2■□□□□ 0.18
RPGR-206ENST00000474584 PHLPP2Q6ZVD8 1323 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 DOCK2Q92608 1830 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
RPGR-206ENST00000474584 ARID4AP29374 1257 aaPredicted RBP16.19■□□□□ 0.18
RPGR-206ENST00000474584 LIFRP42702 1097 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 ETF1P62495 437 aaKnown RBP16.19■□□□□ 0.18
RPGR-206ENST00000474584 KRBA2Q6ZNG9 492 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 METTL16Q86W50 562 aaKnown RBP16.19■□□□□ 0.18
RPGR-206ENST00000474584 SYNE4Q8N205 404 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 KRI1Q8N9T8 703 aaKnown RBP16.19■□□□□ 0.18
RPGR-206ENST00000474584 CLIC6Q96NY7 704 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 RANBP6O60518 1105 aaKnown RBP16.19■□□□□ 0.18
RPGR-206ENST00000474584 SAFBQ15424 915 aaKnown RBP eCLIP16.19■□□□□ 0.18
RPGR-206ENST00000474584 ALX1Q15699 326 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 CCDC93Q567U6 631 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 VSTM4Q8IW00 320 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 STRBPQ96SI9 672 aaKnown RBP16.19■□□□□ 0.18
RPGR-206ENST00000474584 SLC26A6Q9BXS9 759 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 NAPBQ9H115 298 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 WWC3Q9ULE0 1092 aa16.19■□□□□ 0.18
RPGR-206ENST00000474584 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.19■□□□□ 0.18
RPGR-206ENST00000474584 TIAM2Q8IVF5 1701 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 ABCA3Q99758 1704 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.18■□□□□ 0.18
RPGR-206ENST00000474584 NUP98P52948 1817 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 PHKA1P46020 1223 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 LONRF3Q496Y0 759 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 MYL10Q9BUA6 226 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 CNNM2Q9H8M5 875 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 ITGB4P16144 1822 aa16.18■□□□□ 0.18
RPGR-206ENST00000474584 IRS4O14654 1257 aaPredicted RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 ZNF771Q7L3S4 317 aaPredicted RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 FCHSD1Q86WN1 690 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 ELOA2Q8IYF1 753 aaPredicted RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 DPF2Q92785 391 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 DNAI1Q9UI46 699 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 PCDHA5Q9Y5H7 936 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 ZSCAN12O43309 604 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 FMNL1O95466 1100 aaPredicted RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 PUM3Q15397 648 aaKnown RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 HLFQ16534 295 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 ERCC6LQ2NKX8 1250 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 TMX1Q9H3N1 280 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
RPGR-206ENST00000474584 FANCLQ9NW38 375 aa16.17■□□□□ 0.18
RPGR-206ENST00000474584 PATL2C9JE40 543 aaKnown RBP16.16■□□□□ 0.18
RPGR-206ENST00000474584 NPHP1O15259 732 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 KRT23Q9C075 422 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
RPGR-206ENST00000474584 MYH6P13533 1939 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 NID2Q14112 1375 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 LRP5O75197 1615 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 PDE8AO60658 829 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 H2AFXP16104 143 aaPredicted RBP16.16■□□□□ 0.18
RPGR-206ENST00000474584 IFNAR1P17181 557 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 EVA1CP58658 441 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 MAP3K12Q12852 859 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
RPGR-206ENST00000474584 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 LPIN2Q92539 896 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
RPGR-206ENST00000474584 SRRTQ9BXP5 876 aaKnown RBP16.16■□□□□ 0.18
RPGR-206ENST00000474584 ZSWIM5Q9P217 1185 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 DACH1Q9UI36 760 aa16.16■□□□□ 0.18
RPGR-206ENST00000474584 ARHGAP6O43182 974 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 IGSF3O75054 1194 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 MMP1P03956 469 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 FAM53CQ9NYF3 392 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 MROH5Q6ZUA9 1318 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
RPGR-206ENST00000474584 MBD4O95243 580 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 POSTNQ15063 836 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 RILPL1Q5EBL4 403 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 MAGEB6Q8N7X4 407 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 SPATA5Q8NB90 893 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 PIGBQ92521 554 aa16.15■□□□□ 0.18
RPGR-206ENST00000474584 EPB41L4AQ9HCS5 686 aaPredicted RBP16.15■□□□□ 0.18
RPGR-206ENST00000474584 TMEM232C9JQI7 657 aa16.14■□□□□ 0.17
RPGR-206ENST00000474584 CTDSPL2Q05D32 466 aa16.14■□□□□ 0.17
RPGR-206ENST00000474584 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
RPGR-206ENST00000474584 FOXP4Q8IVH2 680 aaPredicted RBP16.14■□□□□ 0.17
RPGR-206ENST00000474584 DIS3L2Q8IYB7 885 aaKnown RBP16.14■□□□□ 0.17
RPGR-206ENST00000474584 MNS1Q8NEH6 495 aa16.14■□□□□ 0.17
RPGR-206ENST00000474584 NOL10Q9BSC4 688 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms