RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 IFNL3Q8IZI9 196 aa24.51■■□□□ 1.51
SMIM11A-204ENST00000474455 SYAP1Q96A49 352 aaPredicted RBP24.51■■□□□ 1.51
SMIM11A-204ENST00000474455 FAM163AQ96GL9 167 aaPredicted RBP24.5■■□□□ 1.51
SMIM11A-204ENST00000474455 GMLQ99445 158 aa24.5■■□□□ 1.51
SMIM11A-204ENST00000474455 CCDC39Q9UFE4 941 aa24.5■■□□□ 1.51
SMIM11A-204ENST00000474455 U3KPZ7 1027 aaPredicted RBP24.5■■□□□ 1.51
SMIM11A-204ENST00000474455 ECM29Q5VYK3 1845 aa24.5■■□□□ 1.51
SMIM11A-204ENST00000474455 GAKO14976 1311 aa24.5■■□□□ 1.51
SMIM11A-204ENST00000474455 GPR75-ASB3A0A0A6YYF3 556 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 SMIM22K7EJ46 135 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 LDHCP07864 332 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 HAND2P61296 217 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 PDCL3Q9H2J4 239 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 FZD9O00144 591 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 CRKP46108 304 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 CIAPIN1Q6FI81 312 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 KCNB2Q92953 911 aa24.49■■□□□ 1.51
SMIM11A-204ENST00000474455 SHTN1A0MZ66 631 aa24.48■■□□□ 1.51
SMIM11A-204ENST00000474455 GPR162Q16538 588 aa24.48■■□□□ 1.51
SMIM11A-204ENST00000474455 FOCADQ5VW36 1801 aa24.48■■□□□ 1.51
SMIM11A-204ENST00000474455 CPA1P15085 419 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 LMNB1P20700 586 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 RHBDL3P58872 404 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 PPP4CP60510 307 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 EVX2Q03828 476 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 TMEM63CQ9P1W3 806 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 ZKSCAN5Q9Y2L8 839 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 ZNF541Q9H0D2 1346 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 APOBEC3HQ6NTF7 200 aaKnown RBP24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 TEKT1Q969V4 418 aa24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 RBM27Q9P2N5 1060 aaKnown RBP24.47■■□□□ 1.51
SMIM11A-204ENST00000474455 MYH1P12882 1939 aa24.46■■□□□ 1.51
SMIM11A-204ENST00000474455 IGSF3O75054 1194 aa24.46■■□□□ 1.51
SMIM11A-204ENST00000474455 GNAT2P19087 354 aa24.46■■□□□ 1.51
SMIM11A-204ENST00000474455 RBM5P52756 815 aaKnown RBP eCLIP24.46■■□□□ 1.51
SMIM11A-204ENST00000474455 STOX1Q6ZVD7 989 aa24.46■■□□□ 1.51
SMIM11A-204ENST00000474455 BAG3O95817 575 aa24.45■■□□□ 1.51
SMIM11A-204ENST00000474455 TMED8Q6PL24 325 aaPredicted RBP24.45■■□□□ 1.51
SMIM11A-204ENST00000474455 HHIPL2Q6UWX4 724 aa24.45■■□□□ 1.51
SMIM11A-204ENST00000474455 SLF2Q8IX21 1173 aa24.45■■□□□ 1.51
SMIM11A-204ENST00000474455 TGFBRAP1Q8WUH2 860 aa24.45■■□□□ 1.51
SMIM11A-204ENST00000474455 NBPF3Q9H094 633 aa24.45■■□□□ 1.51
SMIM11A-204ENST00000474455 CYP2D7A0A087X1C5 515 aa24.45■■□□□ 1.5
SMIM11A-204ENST00000474455 SLC4A8Q2Y0W8 1093 aa24.45■■□□□ 1.5
SMIM11A-204ENST00000474455 UPF3BQ9BZI7 483 aaKnown RBP24.45■■□□□ 1.5
SMIM11A-204ENST00000474455 CRNKL1Q9BZJ0 848 aaKnown RBP24.45■■□□□ 1.5
SMIM11A-204ENST00000474455 NAPBQ9H115 298 aa24.45■■□□□ 1.5
SMIM11A-204ENST00000474455 INCENPQ9NQS7 918 aa24.45■■□□□ 1.5
SMIM11A-204ENST00000474455 GJA3Q9Y6H8 435 aa24.45■■□□□ 1.5
SMIM11A-204ENST00000474455 NAV1Q8NEY1 1877 aa24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 TDO2P48775 406 aa24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 ALX1Q15699 326 aa24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 STK11IPQ8N1F8 1099 aa24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 MAP7D2Q96T17 732 aa24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 NOL10Q9BSC4 688 aaKnown RBP24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 DCP1AQ9NPI6 582 aaPredicted RBP24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 TACC3Q9Y6A5 838 aa24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 TIAM2Q8IVF5 1701 aa24.44■■□□□ 1.5
SMIM11A-204ENST00000474455 NKX2-3Q8TAU0 364 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 RNF181Q9P0P0 153 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 MYO3BQ8WXR4 1341 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 SYCE3A1L190 88 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 EIF6P56537 245 aaKnown RBP24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 CTDSPL2Q05D32 466 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 CFAP100Q494V2 611 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 CDC42EP5Q6NZY7 148 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 MAPKAPK5Q8IW41 473 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 TEX11Q8IYF3 940 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 ZDHHC15Q96MV8 337 aa24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.43■■□□□ 1.5
SMIM11A-204ENST00000474455 ZKSCAN1P17029 563 aaPredicted RBP24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 TNIP1Q15025 636 aa24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 RNF20Q5VTR2 975 aa24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 AGBL3Q8NEM8 1001 aa24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 PRMT6Q96LA8 375 aaPredicted RBP24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 JAKMIP1Q96N16 626 aaKnown RBP24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 MRIQ9BWK5 157 aa24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 TSPY26PQ9H489 355 aa24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 USP40Q9NVE5 1235 aa24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 MKRN1Q9UHC7 482 aaKnown RBP24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 SERPINA10Q9UK55 444 aa24.42■■□□□ 1.5
SMIM11A-204ENST00000474455 ZNF213O14771 459 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 USP5P45974 858 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 CACNB3P54284 484 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 IMMTQ16891 758 aaKnown RBP24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 CTNNA3Q9UI47 895 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 WDR33Q9C0J8 1336 aaKnown RBP24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 MINDY4BA8MYZ0 360 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 E7EWF7 191 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 USP17L8P0C7I0 530 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 CYP2D6P10635 497 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 CASTP20810 708 aaKnown RBP24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 TSGA10IPQ3SY00 556 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 CTR9Q6PD62 1173 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 TBC1D10CQ8IV04 446 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 NACAP1Q9BZK3 213 aa24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 DDX4Q9NQI0 724 aaKnown RBP24.41■■□□□ 1.5
SMIM11A-204ENST00000474455 USP17L12C9JPN9 530 aa24.4■■□□□ 1.5
SMIM11A-204ENST00000474455 USP17L21D6R901 530 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms