RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 PLCG2P16885 1265 aa24.17■■□□□ 1.46
CDHR3-210ENST00000474330 HDLBPQ00341 1268 aaKnown RBP24.17■■□□□ 1.46
CDHR3-210ENST00000474330 DAGLAQ9Y4D2 1042 aa24.17■■□□□ 1.46
CDHR3-210ENST00000474330 CPA1P15085 419 aa24.16■■□□□ 1.46
CDHR3-210ENST00000474330 RPS6KB1P23443 525 aa24.16■■□□□ 1.46
CDHR3-210ENST00000474330 TNIP1Q15025 636 aa24.16■■□□□ 1.46
CDHR3-210ENST00000474330 CHADLQ6NUI6 762 aa24.16■■□□□ 1.46
CDHR3-210ENST00000474330 RSBN1LQ6PCB5 846 aaPredicted RBP24.16■■□□□ 1.46
CDHR3-210ENST00000474330 SH3RF3Q8TEJ3 882 aaPredicted RBP24.16■■□□□ 1.46
CDHR3-210ENST00000474330 DCP1AQ9NPI6 582 aaPredicted RBP24.16■■□□□ 1.46
CDHR3-210ENST00000474330 GPRC5DQ9NZD1 345 aa24.16■■□□□ 1.46
CDHR3-210ENST00000474330 CDK5RAP2Q96SN8 1893 aa24.15■■□□□ 1.46
CDHR3-210ENST00000474330 GMPSP49915 693 aaPredicted RBP24.15■■□□□ 1.46
CDHR3-210ENST00000474330 LDHDQ86WU2 507 aa24.15■■□□□ 1.46
CDHR3-210ENST00000474330 KIAA0825Q8IV33 1275 aa24.15■■□□□ 1.46
CDHR3-210ENST00000474330 TEKT1Q969V4 418 aa24.15■■□□□ 1.46
CDHR3-210ENST00000474330 NBPF3Q9H094 633 aa24.15■■□□□ 1.46
CDHR3-210ENST00000474330 ALDH8A1Q9H2A2 487 aaPredicted RBP24.15■■□□□ 1.46
CDHR3-210ENST00000474330 PDRG1Q9NUG6 133 aa24.15■■□□□ 1.46
CDHR3-210ENST00000474330 APLP1P51693 650 aa24.14■■□□□ 1.46
CDHR3-210ENST00000474330 COL9A3Q14050 684 aaPredicted RBP24.14■■□□□ 1.46
CDHR3-210ENST00000474330 EAPPQ56P03 285 aaPredicted RBP24.14■■□□□ 1.46
CDHR3-210ENST00000474330 PCNTO95613 3336 aa24.14■■□□□ 1.46
CDHR3-210ENST00000474330 RHBDL3P58872 404 aa24.13■■□□□ 1.45
CDHR3-210ENST00000474330 PNMA8AQ86V59 439 aaPredicted RBP24.13■■□□□ 1.45
CDHR3-210ENST00000474330 MKRN1Q9UHC7 482 aaKnown RBP24.13■■□□□ 1.45
CDHR3-210ENST00000474330 ANAPC4Q9UJX5 808 aa24.13■■□□□ 1.45
CDHR3-210ENST00000474330 ZBTB12Q9Y330 459 aaPredicted RBP24.13■■□□□ 1.45
CDHR3-210ENST00000474330 LMOD1P29536 600 aaPredicted RBP24.13■■□□□ 1.45
CDHR3-210ENST00000474330 CRKP46108 304 aa24.13■■□□□ 1.45
CDHR3-210ENST00000474330 AK2P54819 239 aa24.13■■□□□ 1.45
CDHR3-210ENST00000474330 HTRA3P83110 453 aa24.13■■□□□ 1.45
CDHR3-210ENST00000474330 DHX32Q7L7V1 743 aaKnown RBP24.13■■□□□ 1.45
CDHR3-210ENST00000474330 TBC1D10CQ8IV04 446 aa24.13■■□□□ 1.45
CDHR3-210ENST00000474330 SHTN1A0MZ66 631 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 USP5P45974 858 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 PPARAQ07869 468 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 SBK1Q52WX2 424 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 CTR9Q6PD62 1173 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 AGBL3Q8NEM8 1001 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 NCOA7Q8NI08 942 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 ZDHHC15Q96MV8 337 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 SERPINA10Q9UK55 444 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 FOCADQ5VW36 1801 aa24.12■■□□□ 1.45
CDHR3-210ENST00000474330 EXOSC10Q01780 885 aaKnown RBP24.11■■□□□ 1.45
CDHR3-210ENST00000474330 GMLQ99445 158 aa24.11■■□□□ 1.45
CDHR3-210ENST00000474330 ARPP21Q9UBL0 812 aaPredicted RBP24.11■■□□□ 1.45
CDHR3-210ENST00000474330 LAMB1P07942 1786 aa24.11■■□□□ 1.45
CDHR3-210ENST00000474330 USP17L12C9JPN9 530 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 USP17L21D6R901 530 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 ITGBL1O95965 494 aaPredicted RBP24.1■■□□□ 1.45
CDHR3-210ENST00000474330 CTDSPL2Q05D32 466 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 AKNAD1Q5T1N1 836 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 TEX11Q8IYF3 940 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 DNAJC5GQ8N7S2 189 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 TGFBRAP1Q8WUH2 860 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 NAV1Q8NEY1 1877 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 MINDY4BA8MYZ0 360 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 TRDNQ13061 729 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 ANKRD1Q15327 319 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 APOBEC3HQ6NTF7 200 aaKnown RBP24.1■■□□□ 1.45
CDHR3-210ENST00000474330 STAG1Q8WVM7 1258 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 ADARB2Q9NS39 739 aaKnown RBP24.1■■□□□ 1.45
CDHR3-210ENST00000474330 CNOT7Q9UIV1 285 aaKnown RBP24.1■■□□□ 1.45
CDHR3-210ENST00000474330 CLEC11AQ9Y240 323 aa24.1■■□□□ 1.45
CDHR3-210ENST00000474330 ECM29Q5VYK3 1845 aa24.09■■□□□ 1.45
CDHR3-210ENST00000474330 USP50Q70EL3 339 aaPredicted RBP24.09■■□□□ 1.45
CDHR3-210ENST00000474330 RALYLQ86SE5 291 aaKnown RBP24.09■■□□□ 1.45
CDHR3-210ENST00000474330 MB21D2Q8IYB1 491 aaPredicted RBP24.09■■□□□ 1.45
CDHR3-210ENST00000474330 DPF2Q92785 391 aa24.09■■□□□ 1.45
CDHR3-210ENST00000474330 RNF41Q9H4P4 317 aaPredicted RBP24.09■■□□□ 1.45
CDHR3-210ENST00000474330 RPS12P25398 132 aaKnown RBP24.08■■□□□ 1.45
CDHR3-210ENST00000474330 HIRAP54198 1017 aaPredicted RBP24.08■■□□□ 1.45
CDHR3-210ENST00000474330 MAP1SQ66K74 1059 aaPredicted RBP24.08■■□□□ 1.45
CDHR3-210ENST00000474330 MFSD6Q6ZSS7 791 aa24.08■■□□□ 1.45
CDHR3-210ENST00000474330 TMX3Q96JJ7 454 aa24.08■■□□□ 1.45
CDHR3-210ENST00000474330 TCEANC2Q96MN5 208 aa24.08■■□□□ 1.45
CDHR3-210ENST00000474330 CNNM2Q9H8M5 875 aa24.08■■□□□ 1.45
CDHR3-210ENST00000474330 MCM9Q9NXL9 1143 aa24.08■■□□□ 1.45
CDHR3-210ENST00000474330 LIMCH1Q9UPQ0 1083 aa24.08■■□□□ 1.45
CDHR3-210ENST00000474330 PASKQ96RG2 1323 aa24.08■■□□□ 1.44
CDHR3-210ENST00000474330 OGFOD1Q8N543 542 aa24.07■■□□□ 1.44
CDHR3-210ENST00000474330 USP40Q9NVE5 1235 aa24.07■■□□□ 1.44
CDHR3-210ENST00000474330 HDAC9Q9UKV0 1011 aa24.07■■□□□ 1.44
CDHR3-210ENST00000474330 WDR19Q8NEZ3 1342 aa24.07■■□□□ 1.44
CDHR3-210ENST00000474330 PCP11498 1178 aaKnown RBP24.06■■□□□ 1.44
CDHR3-210ENST00000474330 MCM5P33992 734 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 TOB2Q14106 344 aaPredicted RBP24.06■■□□□ 1.44
CDHR3-210ENST00000474330 CDC42EP5Q6NZY7 148 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 FBXL16Q8N461 479 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 AGXT2Q9BYV1 514 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 KRT23Q9C075 422 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 TACC3Q9Y6A5 838 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 NEDD4P46934 1319 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 DDX60LQ5H9U9 1706 aaKnown RBP24.06■■□□□ 1.44
CDHR3-210ENST00000474330 MYH1P12882 1939 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 CYP2D7A0A087X1C5 515 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 FGRP09769 529 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 USP17L8P0C7I0 530 aa24.06■■□□□ 1.44
CDHR3-210ENST00000474330 C12orf60Q5U649 245 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms