RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF569Q5MCW4 686 aa21.25■□□□□ 0.99
ECHDC1-214ENST00000474289 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
ECHDC1-214ENST00000474289 NFAT5O94916 1531 aa21.25■□□□□ 0.99
ECHDC1-214ENST00000474289 TRMT44Q8IYL2 757 aaKnown RBP21.25■□□□□ 0.99
ECHDC1-214ENST00000474289 MED4Q9NPJ6 270 aa21.25■□□□□ 0.99
ECHDC1-214ENST00000474289 AKR1B15C9JRZ8 316 aaPredicted RBP21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 PPFIA4O75335 1185 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 TUBB4BP68371 445 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 NEXNQ0ZGT2 675 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 VPS37DQ86XT2 251 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 TEX2Q8IWB9 1127 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 ANKRD24Q8TF21 1146 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 PANX2Q96RD6 677 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 GBP3Q9H0R5 595 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 AIFM3Q96NN9 605 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 MYCBPQ99417 103 aaPredicted RBP21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 KCNH3Q9ULD8 1083 aa21.24■□□□□ 0.99
ECHDC1-214ENST00000474289 CTAGE9A4FU28 777 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 CPP00450 1065 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 NR1I3Q14994 352 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 EFCAB13Q8IY85 973 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 RBM33Q96EV2 1170 aaKnown RBP21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 DEF6Q9H4E7 631 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 MAN1B1Q9UKM7 699 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 PHF8Q9UPP1 1060 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 MYL6BP14649 208 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 MDM2Q00987 491 aaPredicted RBP21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 TUBB2AQ13885 445 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 SART3Q15020 963 aaKnown RBP21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 MAP3K14Q99558 947 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 MYD88Q99836 296 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 TUBB2BQ9BVA1 445 aa21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 SAMSN1Q9NSI8 373 aaKnown RBP21.23■□□□□ 0.99
ECHDC1-214ENST00000474289 PRC1O43663 620 aa21.22■□□□□ 0.99
ECHDC1-214ENST00000474289 RNF40O75150 1001 aa21.22■□□□□ 0.99
ECHDC1-214ENST00000474289 HAND2P61296 217 aa21.22■□□□□ 0.99
ECHDC1-214ENST00000474289 ENOX1Q8TC92 643 aaKnown RBP21.22■□□□□ 0.99
ECHDC1-214ENST00000474289 CTAGE15A4D2H0 777 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 CTAGE8P0CG41 777 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 ZNF827Q17R98 1081 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 CTAGE6Q86UF2 777 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 NUTM2AQ8IVF1 878 aaPredicted RBP21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 SUGP1Q8IWZ8 645 aaKnown RBP21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 CTAGE4Q8IX94 777 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 SLC35F6Q8N357 371 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 MED15Q96RN5 788 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 ARHGAP23Q9P227 1491 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 TADA2BQ86TJ2 420 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 NOA1Q8NC60 698 aaKnown RBP21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 ACBD3Q9H3P7 528 aa21.21■□□□□ 0.99
ECHDC1-214ENST00000474289 A0A1B0GTH6 734 aa21.2■□□□□ 0.99
ECHDC1-214ENST00000474289 M0R2C6 588 aa21.2■□□□□ 0.99
ECHDC1-214ENST00000474289 CHRM1P11229 460 aaPredicted RBP21.2■□□□□ 0.99
ECHDC1-214ENST00000474289 AMOTQ4VCS5 1084 aa21.2■□□□□ 0.99
ECHDC1-214ENST00000474289 RASGRP2Q7LDG7 609 aa21.2■□□□□ 0.99
ECHDC1-214ENST00000474289 CDC5LQ99459 802 aaKnown RBP21.2■□□□□ 0.99
ECHDC1-214ENST00000474289 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.99
ECHDC1-214ENST00000474289 TEX33O43247 280 aa21.2■□□□□ 0.98
ECHDC1-214ENST00000474289 RBL2Q08999 1139 aa21.2■□□□□ 0.98
ECHDC1-214ENST00000474289 DNAJC21Q5F1R6 531 aaKnown RBP21.2■□□□□ 0.98
ECHDC1-214ENST00000474289 NAA15Q9BXJ9 866 aaKnown RBP21.2■□□□□ 0.98
ECHDC1-214ENST00000474289 SYF2O95926 243 aaKnown RBP21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 SLC39A6Q13433 755 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 E2F4Q16254 413 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 MB21D2Q8IYB1 491 aaPredicted RBP21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 AFAP1L1Q8TED9 768 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 NWD2Q9ULI1 1742 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 ANTXR2P58335 489 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 POSTNQ15063 836 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 WHAMMP3Q1A5X7 153 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 RABL6Q3YEC7 729 aaPredicted RBP21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 SPECC1Q5M775 1068 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 MMS22LQ6ZRQ5 1243 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 MLKLQ8NB16 471 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 CPLX3Q8WVH0 158 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 NEUROD6Q96NK8 337 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 ALG1Q9BT22 464 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 C4AP0C0L4 1744 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 C4BP0C0L5 1744 aa21.19■□□□□ 0.98
ECHDC1-214ENST00000474289 RNF113AO15541 343 aaKnown RBP21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 PRPF6O94906 941 aaKnown RBP21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 TUBBP07437 444 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 KRT40Q6A162 431 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 METTL22Q9BUU2 404 aaPredicted RBP21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 ABL1P00519 1130 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 PRR29P0C7W0 189 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 AARSP49588 968 aaKnown RBP eCLIP21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 WDR93Q6P2C0 686 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 UBE3BQ7Z3V4 1068 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 IGSF22Q8N9C0 903 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 XAGE3Q8WTP9 111 aa21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 NAPGQ99747 312 aaPredicted RBP21.18■□□□□ 0.98
ECHDC1-214ENST00000474289 A0A087WUV0 522 aaPredicted RBP21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 FOXP2O15409 715 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 PIP4K2AP48426 406 aaPredicted RBP21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 TTC39AQ5SRH9 613 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 NT5DC1Q5TFE4 455 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 DACH1Q9UI36 760 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms