RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 BCO2Q9BYV7 579 aa7□□□□□ -1.29
TMEM50B-208ENST00000474272 SSU72Q9NP77 194 aaKnown RBP7□□□□□ -1.29
TMEM50B-208ENST00000474272 MBNL3Q9NUK0 354 aaKnown RBP7□□□□□ -1.29
TMEM50B-208ENST00000474272 NLRP2Q9NX02 1062 aa7□□□□□ -1.29
TMEM50B-208ENST00000474272 PLAGL2Q9UPG8 496 aa7□□□□□ -1.29
TMEM50B-208ENST00000474272 CSADQ9Y600 493 aa7□□□□□ -1.29
TMEM50B-208ENST00000474272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
TMEM50B-208ENST00000474272 RNASE1P07998 156 aaKnown RBP6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 ITIH2P19823 946 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 PPP2R3AQ06190 1150 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 ZNF124Q15973 351 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 AOC3Q16853 763 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 MAP1SQ66K74 1059 aaPredicted RBP6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 NXPE4Q6UWF7 544 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 SULF2Q8IWU5 870 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 TOP6BLQ8N6T0 577 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 RETREG2Q8NC44 543 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 RC3H2Q9HBD1 1191 aaKnown RBP6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 KRT82Q9NSB4 513 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 PCOLCE2Q9UKZ9 415 aa6.99□□□□□ -1.29
TMEM50B-208ENST00000474272 FUT4P22083 530 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 OXCT1P55809 520 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 ARHGAP27Q6ZUM4 889 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 TMC7Q7Z402 723 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 GPBAR1Q8TDU6 330 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 DMRTB1Q96MA1 342 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 RBCK1Q9BYM8 510 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 PRDM7Q9NQW5 492 aa6.98□□□□□ -1.29
TMEM50B-208ENST00000474272 ARNTP27540 789 aa6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 ZC3H12AQ5D1E8 599 aaKnown RBP6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 PI4K2BQ8TCG2 481 aa6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 GRIN3AQ8TCU5 1115 aa6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 ALKBH8Q96BT7 664 aaKnown RBP6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 MISP3Q96FF7 219 aa6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 CBX8Q9HC52 389 aa6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 PPP4R2Q9NY27 417 aa6.97□□□□□ -1.29
TMEM50B-208ENST00000474272 PRKCQQ04759 706 aa6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 IFI16Q16666 785 aaKnown RBP6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 UBE3DQ7Z6J8 389 aa6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 LRRN4CLQ8ND94 238 aa6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 HEXIM2Q96MH2 286 aaKnown RBP6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 BIN2Q9UBW5 565 aaPredicted RBP6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 VAV3Q9UKW4 847 aa6.96□□□□□ -1.3
TMEM50B-208ENST00000474272 PNMA6FA0A0J9YX94 578 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 SOWAHDA6NJG2 315 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 BIN1O00499 593 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 CEACAM5P06731 702 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 FAM168AQ92567 244 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 ACSBG1Q96GR2 724 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 HRASLS5Q96KN8 279 aa6.95□□□□□ -1.3
TMEM50B-208ENST00000474272 DCDC2CA8MYV0 355 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 FBXO24O75426 580 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 PAGE1O75459 146 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 TPTE2Q6XPS3 522 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 C12orf40Q86WS4 652 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 RNF214Q8ND24 703 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 SETDB2Q96T68 719 aa6.94□□□□□ -1.3
TMEM50B-208ENST00000474272 NME2P22392 152 aa6.93□□□□□ -1.3
TMEM50B-208ENST00000474272 ERVK-24P63145 666 aa6.93□□□□□ -1.3
TMEM50B-208ENST00000474272 PLCB3Q01970 1234 aa6.93□□□□□ -1.3
TMEM50B-208ENST00000474272 ZNF252P-AS1Q0IIN9 211 aa6.93□□□□□ -1.3
TMEM50B-208ENST00000474272 FAM214BQ7L5A3 538 aa6.93□□□□□ -1.3
TMEM50B-208ENST00000474272 ATG4DQ86TL0 474 aaPredicted RBP6.93□□□□□ -1.3
TMEM50B-208ENST00000474272 TMEM265A0A087WTH1 108 aa6.92□□□□□ -1.3
TMEM50B-208ENST00000474272 XRCC5P13010 732 aaKnown RBP6.92□□□□□ -1.3
TMEM50B-208ENST00000474272 DSC3Q14574 896 aa6.92□□□□□ -1.3
TMEM50B-208ENST00000474272 RASIP1Q5U651 963 aa6.92□□□□□ -1.3
TMEM50B-208ENST00000474272 C3orf58Q8NDZ4 430 aa6.92□□□□□ -1.3
TMEM50B-208ENST00000474272 BMP6P22004 513 aa6.91□□□□□ -1.3
TMEM50B-208ENST00000474272 MAPK1P28482 360 aa6.91□□□□□ -1.3
TMEM50B-208ENST00000474272 NTF4P34130 210 aa6.91□□□□□ -1.3
TMEM50B-208ENST00000474272 NECAB3Q96P71 396 aaPredicted RBP6.91□□□□□ -1.3
TMEM50B-208ENST00000474272 MKNK2Q9HBH9 465 aa6.91□□□□□ -1.3
TMEM50B-208ENST00000474272 PICK1Q9NRD5 415 aa6.91□□□□□ -1.3
TMEM50B-208ENST00000474272 DCTN4Q9UJW0 460 aa6.91□□□□□ -1.3
TMEM50B-208ENST00000474272 ENC1O14682 589 aa6.9□□□□□ -1.3
TMEM50B-208ENST00000474272 HNRNPUQ00839 825 aaKnown RBP eCLIP6.9□□□□□ -1.3
TMEM50B-208ENST00000474272 ENOX2Q16206 610 aaKnown RBP6.9□□□□□ -1.3
TMEM50B-208ENST00000474272 ANGEL2Q5VTE6 544 aaKnown RBP6.9□□□□□ -1.3
TMEM50B-208ENST00000474272 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.3
TMEM50B-208ENST00000474272 TNKS2Q9H2K2 1166 aa6.9□□□□□ -1.3
TMEM50B-208ENST00000474272 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
TMEM50B-208ENST00000474272 TREHO43280 583 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 FARP2O94887 1054 aaPredicted RBP6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 IKZF1Q13422 519 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 NKPD1Q17RQ9 610 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 SPACA3Q8IXA5 215 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 OSBPL7Q9BZF2 842 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 CACNA2D2Q9NY47 1150 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
TMEM50B-208ENST00000474272 MAPK8P45983 427 aa6.88□□□□□ -1.31
TMEM50B-208ENST00000474272 ZP2Q05996 745 aa6.88□□□□□ -1.31
TMEM50B-208ENST00000474272 SLC23A3Q6PIS1 610 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms