RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 RAP1GAPP47736 663 aa5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 CCNJLQ8IV13 435 aa5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 LRRC56Q8IYG6 542 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 PLD6Q8N2A8 252 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 BSNDQ8WZ55 320 aa5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 EHD4Q9H223 541 aa5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 LIN7BQ9HAP6 207 aa5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 LMCD1Q9NZU5 365 aa5.71□□□□□ -1.5
ECHDC1-213ENST00000474240 A0A1W2PP55 124 aa5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 DYNC1LI2O43237 492 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 HNRNPUQ00839 825 aaKnown RBP eCLIP5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 GSTM4Q03013 218 aa5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 MLANAQ16655 118 aa5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 PEAR1Q5VY43 1037 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 FAM181AQ8N9Y4 354 aa5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 ZSCAN18Q8TBC5 510 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 DDX54Q8TDD1 881 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 NXPE3Q969Y0 559 aa5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 MISP3Q96FF7 219 aa5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 FAM105AQ9NUU6 356 aa5.7□□□□□ -1.5
ECHDC1-213ENST00000474240 POLR3DP05423 398 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 GNA15P30679 374 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 RPS26P11Q5JNZ5 115 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 USPL1Q5W0Q7 1092 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 DYMQ7RTS9 669 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 BHLHE22Q8NFJ8 381 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 BCL2L13Q9BXK5 485 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 SOX17Q9H6I2 414 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 ACSS3Q9H6R3 686 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 LGR6Q9HBX8 967 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 C1GALT1Q9NS00 363 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 AP4E1Q9UPM8 1137 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 DAGLAQ9Y4D2 1042 aa5.69□□□□□ -1.5
ECHDC1-213ENST00000474240 ZSCAN22P10073 491 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 ESRRAP11474 423 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 ITPKAP23677 461 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 GSTT1P30711 240 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 XPCQ01831 940 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 AKAP4Q5JQC9 854 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 FBXO33Q7Z6M2 555 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 PI4K2BQ8TCG2 481 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 ASAP3Q8TDY4 903 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 NRSN2Q9GZP1 204 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 FAM8A1Q9UBU6 413 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 PPM1HQ9ULR3 514 aa5.68□□□□□ -1.5
ECHDC1-213ENST00000474240 A0A096LPE4 126 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 A0A1W2PPZ6 126 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 TSPAN15O95858 294 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 CTSBP07858 339 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 GRM2Q14416 872 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 HP1BP3Q5SSJ5 553 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 SEZ6L2Q6UXD5 910 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 ZSWIM9Q86XI8 627 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 NETO1Q8TDF5 533 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 ANKRD24Q8TF21 1146 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 TCF12Q99081 682 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 BCO2Q9BYV7 579 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 CLEC4MQ9H2X3 399 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 MRS2Q9HD23 443 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 LATS2Q9NRM7 1088 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 U3KQE9 123 aa5.67□□□□□ -1.5
ECHDC1-213ENST00000474240 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 EIF4BP23588 611 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 OGFOD3Q6PK18 319 aa5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 TTLL10Q6ZVT0 673 aa5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 EPS8L3Q8TE67 593 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 C12orf49Q9H741 205 aa5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 ABCB6Q9NP58 842 aa5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 CRIM1Q9NZV1 1036 aa5.66□□□□□ -1.5
ECHDC1-213ENST00000474240 ZNF503-AS2A6NEH8 195 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 DAB2P98082 770 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 PSMD2Q13200 908 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 KCNMB1Q16558 191 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 DTHD1Q6ZMT9 781 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 TMC4Q7Z404 712 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 FLAD1Q8NFF5 587 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 PPP1R16BQ96T49 567 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 DUSP9Q99956 384 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 CEP44Q9C0F1 390 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 PODXL2Q9NZ53 605 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 AK5Q9Y6K8 562 aa5.65□□□□□ -1.5
ECHDC1-213ENST00000474240 RBM47A0AV96 593 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 SORBS3O60504 671 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 MAOBP27338 520 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 ASPAP45381 313 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 PPP2R3AQ06190 1150 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 CYP27C1Q4G0S4 372 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 GIPC2Q8TF65 315 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 LIN37Q96GY3 246 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 ZNF576Q9H609 170 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 PARP2Q9UGN5 583 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 JAG2Q9Y219 1238 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 SAMM50Q9Y512 469 aa5.64□□□□□ -1.51
ECHDC1-213ENST00000474240 METTL12A8MUP2 240 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 B3GALT4O96024 378 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 FAM87AP0C7U9 286 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 GRIA4P48058 902 aa5.63□□□□□ -1.51
ECHDC1-213ENST00000474240 PRKCQQ04759 706 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms