RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 ATRNL1Q5VV63 1379 aa24.42■■□□□ 1.5
TMEM54-204ENST00000474144 DDTLA6NHG4 134 aaPredicted RBP24.42■■□□□ 1.5
TMEM54-204ENST00000474144 IRF6O14896 467 aa24.42■■□□□ 1.5
TMEM54-204ENST00000474144 MYO5AQ9Y4I1 1855 aaKnown RBP24.41■■□□□ 1.5
TMEM54-204ENST00000474144 CYP2E1P05181 493 aaPredicted RBP24.41■■□□□ 1.5
TMEM54-204ENST00000474144 GSTO1P78417 241 aa24.41■■□□□ 1.5
TMEM54-204ENST00000474144 ZSCAN29Q8IWY8 852 aaPredicted RBP24.41■■□□□ 1.5
TMEM54-204ENST00000474144 FAM43AQ8N2R8 423 aa24.41■■□□□ 1.5
TMEM54-204ENST00000474144 ZBTB40Q9NUA8 1239 aa24.41■■□□□ 1.5
TMEM54-204ENST00000474144 ZAP70P43403 619 aa24.4■■□□□ 1.5
TMEM54-204ENST00000474144 C20orf194Q5TEA3 1177 aa24.4■■□□□ 1.5
TMEM54-204ENST00000474144 SIRT2Q8IXJ6 389 aa24.4■■□□□ 1.5
TMEM54-204ENST00000474144 DDX19BQ9UMR2 479 aa24.4■■□□□ 1.5
TMEM54-204ENST00000474144 PHF20L1A8MW92 1017 aa24.39■■□□□ 1.49
TMEM54-204ENST00000474144 LDHCP07864 332 aa24.39■■□□□ 1.49
TMEM54-204ENST00000474144 PPIL2Q13356 520 aa24.39■■□□□ 1.49
TMEM54-204ENST00000474144 ZNF512BQ96KM6 892 aaPredicted RBP24.39■■□□□ 1.49
TMEM54-204ENST00000474144 PIH1D3Q9NQM4 214 aaKnown RBP24.39■■□□□ 1.49
TMEM54-204ENST00000474144 PPATQ06203 517 aa24.38■■□□□ 1.49
TMEM54-204ENST00000474144 IL1RAPL2Q9NP60 686 aa24.38■■□□□ 1.49
TMEM54-204ENST00000474144 MAST2Q6P0Q8 1798 aa24.38■■□□□ 1.49
TMEM54-204ENST00000474144 CETPP11597 493 aa24.37■■□□□ 1.49
TMEM54-204ENST00000474144 SNAPC2Q13487 334 aa24.37■■□□□ 1.49
TMEM54-204ENST00000474144 NOL9Q5SY16 702 aaKnown RBP24.37■■□□□ 1.49
TMEM54-204ENST00000474144 ADGRA1Q86SQ6 560 aa24.37■■□□□ 1.49
TMEM54-204ENST00000474144 AACSQ86V21 672 aa24.37■■□□□ 1.49
TMEM54-204ENST00000474144 ERC1Q8IUD2 1116 aa24.37■■□□□ 1.49
TMEM54-204ENST00000474144 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.37■■□□□ 1.49
TMEM54-204ENST00000474144 SH3RF3Q8TEJ3 882 aaPredicted RBP24.37■■□□□ 1.49
TMEM54-204ENST00000474144 HPS5Q9UPZ3 1129 aa24.37■■□□□ 1.49
TMEM54-204ENST00000474144 NDUFB9Q9Y6M9 179 aa24.37■■□□□ 1.49
TMEM54-204ENST00000474144 BTBD19C9JJ37 291 aa24.36■■□□□ 1.49
TMEM54-204ENST00000474144 APBB1O00213 710 aa24.36■■□□□ 1.49
TMEM54-204ENST00000474144 CAP1Q01518 475 aa24.36■■□□□ 1.49
TMEM54-204ENST00000474144 TAF1CQ15572 869 aaPredicted RBP24.36■■□□□ 1.49
TMEM54-204ENST00000474144 PKN2Q16513 984 aaKnown RBP24.36■■□□□ 1.49
TMEM54-204ENST00000474144 NAA16Q6N069 864 aaPredicted RBP24.36■■□□□ 1.49
TMEM54-204ENST00000474144 RPAP2Q8IXW5 612 aaPredicted RBP24.36■■□□□ 1.49
TMEM54-204ENST00000474144 RHPN1Q8TCX5 695 aa24.36■■□□□ 1.49
TMEM54-204ENST00000474144 AATFQ9NY61 560 aaKnown RBP eCLIP24.36■■□□□ 1.49
TMEM54-204ENST00000474144 MAP3K10Q02779 954 aa24.35■■□□□ 1.49
TMEM54-204ENST00000474144 CD99L2Q8TCZ2 262 aa24.35■■□□□ 1.49
TMEM54-204ENST00000474144 TEX11Q8IYF3 940 aa24.34■■□□□ 1.49
TMEM54-204ENST00000474144 ZFYVE28Q9HCC9 887 aa24.34■■□□□ 1.49
TMEM54-204ENST00000474144 TRIM17Q9Y577 477 aa24.34■■□□□ 1.49
TMEM54-204ENST00000474144 FAM196BA6NMK8 535 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 NPM3O75607 178 aaKnown RBP24.33■■□□□ 1.49
TMEM54-204ENST00000474144 RGS19P49795 217 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 SP3Q02447 781 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 HSP90AB4PQ58FF6 505 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 FBXO46Q6PJ61 603 aaPredicted RBP24.33■■□□□ 1.49
TMEM54-204ENST00000474144 OTOP1Q7RTM1 612 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 SCYL3Q8IZE3 742 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 OSBPL5Q9H0X9 879 aaPredicted RBP24.33■■□□□ 1.49
TMEM54-204ENST00000474144 ANTXR1Q9H6X2 564 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 KCNH4Q9UQ05 1017 aa24.33■■□□□ 1.49
TMEM54-204ENST00000474144 MAP4K4O95819 1239 aaPredicted RBP24.32■■□□□ 1.48
TMEM54-204ENST00000474144 SOX10P56693 466 aa24.32■■□□□ 1.48
TMEM54-204ENST00000474144 ERO1AQ96HE7 468 aa24.32■■□□□ 1.48
TMEM54-204ENST00000474144 BCL11AQ9H165 835 aa24.32■■□□□ 1.48
TMEM54-204ENST00000474144 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.32■■□□□ 1.48
TMEM54-204ENST00000474144 HMMRO75330 724 aa24.31■■□□□ 1.48
TMEM54-204ENST00000474144 PTPRAP18433 802 aa24.31■■□□□ 1.48
TMEM54-204ENST00000474144 MOGSQ13724 837 aa24.31■■□□□ 1.48
TMEM54-204ENST00000474144 PDE3AQ14432 1141 aa24.31■■□□□ 1.48
TMEM54-204ENST00000474144 CDK5RAP2Q96SN8 1893 aa24.31■■□□□ 1.48
TMEM54-204ENST00000474144 NOL10Q9BSC4 688 aaKnown RBP24.31■■□□□ 1.48
TMEM54-204ENST00000474144 DOCK1Q14185 1865 aa24.3■■□□□ 1.48
TMEM54-204ENST00000474144 BAG3O95817 575 aa24.3■■□□□ 1.48
TMEM54-204ENST00000474144 PPP4CP60510 307 aa24.3■■□□□ 1.48
TMEM54-204ENST00000474144 TGFBRAP1Q8WUH2 860 aa24.3■■□□□ 1.48
TMEM54-204ENST00000474144 KIF1BPQ96EK5 621 aa24.3■■□□□ 1.48
TMEM54-204ENST00000474144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.3■■□□□ 1.48
TMEM54-204ENST00000474144 TBC1D12O60347 775 aa24.29■■□□□ 1.48
TMEM54-204ENST00000474144 IDH1O75874 414 aaKnown RBP24.29■■□□□ 1.48
TMEM54-204ENST00000474144 DYNLL1P63167 89 aaKnown RBP24.29■■□□□ 1.48
TMEM54-204ENST00000474144 CCDC84Q86UT8 332 aaPredicted RBP24.29■■□□□ 1.48
TMEM54-204ENST00000474144 ZCCHC17Q9NP64 241 aaKnown RBP24.29■■□□□ 1.48
TMEM54-204ENST00000474144 PICK1Q9NRD5 415 aa24.29■■□□□ 1.48
TMEM54-204ENST00000474144 ZHX2Q9Y6X8 837 aa24.29■■□□□ 1.48
TMEM54-204ENST00000474144 PHIPQ8WWQ0 1821 aa24.28■■□□□ 1.48
TMEM54-204ENST00000474144 COL2A1P02458 1487 aaPredicted RBP24.28■■□□□ 1.48
TMEM54-204ENST00000474144 TLR2O60603 784 aa24.28■■□□□ 1.48
TMEM54-204ENST00000474144 CTNND1O60716 968 aaKnown RBP24.28■■□□□ 1.48
TMEM54-204ENST00000474144 CYP7A1P22680 504 aa24.28■■□□□ 1.48
TMEM54-204ENST00000474144 MAPKAPK5Q8IW41 473 aa24.28■■□□□ 1.48
TMEM54-204ENST00000474144 CLASRPQ8N2M8 674 aaKnown RBP24.28■■□□□ 1.48
TMEM54-204ENST00000474144 CHMP4BQ9H444 224 aaKnown RBP24.28■■□□□ 1.48
TMEM54-204ENST00000474144 SIPA1L1O43166 1804 aa24.28■■□□□ 1.48
TMEM54-204ENST00000474144 FOCADQ5VW36 1801 aa24.28■■□□□ 1.48
TMEM54-204ENST00000474144 HTTP42858 3142 aa24.28■■□□□ 1.48
TMEM54-204ENST00000474144 ZSWIM8A7E2V4 1837 aa24.27■■□□□ 1.48
TMEM54-204ENST00000474144 PDHXO00330 501 aa24.27■■□□□ 1.48
TMEM54-204ENST00000474144 RRP1BQ14684 758 aaKnown RBP24.27■■□□□ 1.48
TMEM54-204ENST00000474144 ANKRD23Q86SG2 305 aa24.27■■□□□ 1.48
TMEM54-204ENST00000474144 MAGEB6Q8N7X4 407 aa24.27■■□□□ 1.48
TMEM54-204ENST00000474144 EFCC1Q9HA90 598 aa24.27■■□□□ 1.48
TMEM54-204ENST00000474144 AFG3L2Q9Y4W6 797 aa24.27■■□□□ 1.48
TMEM54-204ENST00000474144 CXCL11O14625 94 aa24.26■■□□□ 1.47
TMEM54-204ENST00000474144 PLCG2P16885 1265 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms