RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 PI16Q6UXB8 463 aa25■■□□□ 1.59
SNX13-206ENST00000474067 EAF2Q96CJ1 260 aaPredicted RBP25■■□□□ 1.59
SNX13-206ENST00000474067 CCDC8Q9H0W5 538 aaPredicted RBP25■■□□□ 1.59
SNX13-206ENST00000474067 MAST2Q6P0Q8 1798 aa25■■□□□ 1.59
SNX13-206ENST00000474067 IFIT2P09913 472 aaKnown RBP24.99■■□□□ 1.59
SNX13-206ENST00000474067 PPIL2Q13356 520 aa24.99■■□□□ 1.59
SNX13-206ENST00000474067 ARHGEF6Q15052 776 aa24.99■■□□□ 1.59
SNX13-206ENST00000474067 TTF1Q15361 905 aaPredicted RBP24.99■■□□□ 1.59
SNX13-206ENST00000474067 TBC1D9Q6ZT07 1266 aa24.99■■□□□ 1.59
SNX13-206ENST00000474067 MIGA2Q7L4E1 593 aa24.99■■□□□ 1.59
SNX13-206ENST00000474067 ZNF112Q9UJU3 913 aa24.99■■□□□ 1.59
SNX13-206ENST00000474067 SNCAIPQ9Y6H5 919 aa24.99■■□□□ 1.59
SNX13-206ENST00000474067 COL2A1P02458 1487 aaPredicted RBP24.98■■□□□ 1.59
SNX13-206ENST00000474067 RFX7Q2KHR2 1363 aa24.98■■□□□ 1.59
SNX13-206ENST00000474067 CCL15-CCL14A0A0B4J2E2 113 aa24.98■■□□□ 1.59
SNX13-206ENST00000474067 PICALMQ13492 652 aa24.98■■□□□ 1.59
SNX13-206ENST00000474067 CCL15Q16663 113 aa24.98■■□□□ 1.59
SNX13-206ENST00000474067 NOL9Q5SY16 702 aaKnown RBP24.98■■□□□ 1.59
SNX13-206ENST00000474067 ZNF296Q8WUU4 475 aaPredicted RBP24.98■■□□□ 1.59
SNX13-206ENST00000474067 DOCK2Q92608 1830 aa24.98■■□□□ 1.59
SNX13-206ENST00000474067 MAP3K12Q12852 859 aa24.97■■□□□ 1.59
SNX13-206ENST00000474067 ZKSCAN4Q969J2 545 aaPredicted RBP24.97■■□□□ 1.59
SNX13-206ENST00000474067 PICK1Q9NRD5 415 aa24.97■■□□□ 1.59
SNX13-206ENST00000474067 SNRKQ9NRH2 765 aa24.97■■□□□ 1.59
SNX13-206ENST00000474067 ATRNL1Q5VV63 1379 aa24.96■■□□□ 1.59
SNX13-206ENST00000474067 CYP2E1P05181 493 aaPredicted RBP24.96■■□□□ 1.59
SNX13-206ENST00000474067 GJA5P36382 358 aa24.96■■□□□ 1.59
SNX13-206ENST00000474067 ZAP70P43403 619 aa24.96■■□□□ 1.59
SNX13-206ENST00000474067 RHBDL3P58872 404 aa24.96■■□□□ 1.59
SNX13-206ENST00000474067 TEX11Q8IYF3 940 aa24.96■■□□□ 1.59
SNX13-206ENST00000474067 ERO1AQ96HE7 468 aa24.96■■□□□ 1.59
SNX13-206ENST00000474067 DHX36Q9H2U1 1008 aaKnown RBP24.96■■□□□ 1.59
SNX13-206ENST00000474067 ZFYVE28Q9HCC9 887 aa24.96■■□□□ 1.59
SNX13-206ENST00000474067 IGF2BP3O00425 579 aaKnown RBP eCLIP24.95■■□□□ 1.58
SNX13-206ENST00000474067 TBC1D12O60347 775 aa24.95■■□□□ 1.58
SNX13-206ENST00000474067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.95■■□□□ 1.58
SNX13-206ENST00000474067 MS4A4AQ96JQ5 239 aa24.95■■□□□ 1.58
SNX13-206ENST00000474067 PPP4CP60510 307 aa24.94■■□□□ 1.58
SNX13-206ENST00000474067 CCDC85CA6NKD9 419 aa24.93■■□□□ 1.58
SNX13-206ENST00000474067 IDH1O75874 414 aaKnown RBP24.93■■□□□ 1.58
SNX13-206ENST00000474067 MAP3K10Q02779 954 aa24.93■■□□□ 1.58
SNX13-206ENST00000474067 TAF1CQ15572 869 aaPredicted RBP24.93■■□□□ 1.58
SNX13-206ENST00000474067 SCYL3Q8IZE3 742 aa24.93■■□□□ 1.58
SNX13-206ENST00000474067 TBC1D2Q9BYX2 928 aa24.93■■□□□ 1.58
SNX13-206ENST00000474067 OSBPL5Q9H0X9 879 aaPredicted RBP24.93■■□□□ 1.58
SNX13-206ENST00000474067 IL1RAPL2Q9NP60 686 aa24.93■■□□□ 1.58
SNX13-206ENST00000474067 TLR7Q9NYK1 1049 aaKnown RBP24.93■■□□□ 1.58
SNX13-206ENST00000474067 HERC5Q9UII4 1024 aaKnown RBP24.93■■□□□ 1.58
SNX13-206ENST00000474067 IRF6O14896 467 aa24.92■■□□□ 1.58
SNX13-206ENST00000474067 CTNND1O60716 968 aaKnown RBP24.92■■□□□ 1.58
SNX13-206ENST00000474067 INPP5BP32019 993 aa24.92■■□□□ 1.58
SNX13-206ENST00000474067 TRIM34Q9BYJ4 488 aa24.92■■□□□ 1.58
SNX13-206ENST00000474067 AATFQ9NY61 560 aaKnown RBP eCLIP24.92■■□□□ 1.58
SNX13-206ENST00000474067 APBB1O00213 710 aa24.91■■□□□ 1.58
SNX13-206ENST00000474067 CXCL11O14625 94 aa24.91■■□□□ 1.58
SNX13-206ENST00000474067 ZNF384Q8TF68 577 aa24.91■■□□□ 1.58
SNX13-206ENST00000474067 BRI3BPQ8WY22 251 aa24.91■■□□□ 1.58
SNX13-206ENST00000474067 LRRCC1Q9C099 1032 aa24.91■■□□□ 1.58
SNX13-206ENST00000474067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.91■■□□□ 1.58
SNX13-206ENST00000474067 DDX4Q9NQI0 724 aaKnown RBP24.91■■□□□ 1.58
SNX13-206ENST00000474067 CYP7A1P22680 504 aa24.9■■□□□ 1.58
SNX13-206ENST00000474067 CRHR2Q13324 411 aa24.9■■□□□ 1.58
SNX13-206ENST00000474067 ZFPM1Q8IX07 1006 aa24.9■■□□□ 1.58
SNX13-206ENST00000474067 CNKSR2Q8WXI2 1034 aa24.9■■□□□ 1.58
SNX13-206ENST00000474067 PI4KBQ9UBF8 816 aa24.9■■□□□ 1.58
SNX13-206ENST00000474067 KCNH4Q9UQ05 1017 aa24.9■■□□□ 1.58
SNX13-206ENST00000474067 DDTLA6NHG4 134 aaPredicted RBP24.89■■□□□ 1.58
SNX13-206ENST00000474067 HLA-DOAP06340 250 aa24.89■■□□□ 1.58
SNX13-206ENST00000474067 SP3Q02447 781 aa24.89■■□□□ 1.58
SNX13-206ENST00000474067 FBXO46Q6PJ61 603 aaPredicted RBP24.89■■□□□ 1.58
SNX13-206ENST00000474067 FASTKD5Q7L8L6 764 aaKnown RBP24.89■■□□□ 1.58
SNX13-206ENST00000474067 SIRT2Q8IXJ6 389 aa24.89■■□□□ 1.58
SNX13-206ENST00000474067 PTPN18Q99952 460 aa24.89■■□□□ 1.58
SNX13-206ENST00000474067 KIF22Q14807 665 aa24.88■■□□□ 1.57
SNX13-206ENST00000474067 ANKRD23Q86SG2 305 aa24.88■■□□□ 1.57
SNX13-206ENST00000474067 SH3RF3Q8TEJ3 882 aaPredicted RBP24.88■■□□□ 1.57
SNX13-206ENST00000474067 GPATCH3Q96I76 525 aa24.88■■□□□ 1.57
SNX13-206ENST00000474067 PIH1D3Q9NQM4 214 aaKnown RBP24.88■■□□□ 1.57
SNX13-206ENST00000474067 PHF20L1A8MW92 1017 aa24.87■■□□□ 1.57
SNX13-206ENST00000474067 C20orf194Q5TEA3 1177 aa24.87■■□□□ 1.57
SNX13-206ENST00000474067 SH3BP5LQ7L8J4 393 aa24.87■■□□□ 1.57
SNX13-206ENST00000474067 FOXP4Q8IVH2 680 aaPredicted RBP24.86■■□□□ 1.57
SNX13-206ENST00000474067 MAGEB6Q8N7X4 407 aa24.86■■□□□ 1.57
SNX13-206ENST00000474067 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNX13-206ENST00000474067 GINM1Q9NU53 330 aa24.86■■□□□ 1.57
SNX13-206ENST00000474067 TLR2O60603 784 aa24.85■■□□□ 1.57
SNX13-206ENST00000474067 PTPRAP18433 802 aa24.85■■□□□ 1.57
SNX13-206ENST00000474067 USP5P45974 858 aa24.85■■□□□ 1.57
SNX13-206ENST00000474067 CRACR2BQ8N4Y2 399 aaPredicted RBP24.85■■□□□ 1.57
SNX13-206ENST00000474067 TGFBRAP1Q8WUH2 860 aa24.85■■□□□ 1.57
SNX13-206ENST00000474067 AS3MTQ9HBK9 375 aa24.85■■□□□ 1.57
SNX13-206ENST00000474067 ZHX2Q9Y6X8 837 aa24.85■■□□□ 1.57
SNX13-206ENST00000474067 FLT1P17948 1338 aa24.85■■□□□ 1.57
SNX13-206ENST00000474067 DOCK1Q14185 1865 aa24.84■■□□□ 1.57
SNX13-206ENST00000474067 BTBD19C9JJ37 291 aa24.84■■□□□ 1.57
SNX13-206ENST00000474067 RRP1P56182 461 aaKnown RBP24.84■■□□□ 1.57
SNX13-206ENST00000474067 FAM43AQ8N2R8 423 aa24.84■■□□□ 1.57
SNX13-206ENST00000474067 PARK7Q99497 189 aaKnown RBP24.84■■□□□ 1.57
SNX13-206ENST00000474067 TRIM17Q9Y577 477 aa24.84■■□□□ 1.57
SNX13-206ENST00000474067 GNRH1P01148 92 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms