RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 MYH3P11055 1940 aa9.19□□□□□ -0.94
CCDC93-207ENST00000474006 FZD9O00144 591 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 GJA5P36382 358 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 CXCL9Q07325 125 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 PDS5AQ29RF7 1337 aaKnown RBP9.18□□□□□ -0.94
CCDC93-207ENST00000474006 STRIP1Q5VSL9 837 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 C9orf131Q5VYM1 1079 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 KBTBD3Q8NAB2 608 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 TBC1D22AQ8WUA7 517 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 MXD3Q9BW11 206 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 LRP2BPQ9P2M1 347 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 ABCF2Q9UG63 623 aa9.18□□□□□ -0.94
CCDC93-207ENST00000474006 KIAA1551Q9HCM1 1747 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 PSMD14O00487 310 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 SPTLC1O15269 473 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 IDH1O75874 414 aaKnown RBP9.17□□□□□ -0.94
CCDC93-207ENST00000474006 VIL1P09327 827 aaKnown RBP9.17□□□□□ -0.94
CCDC93-207ENST00000474006 MCM6Q14566 821 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 GRIK5Q16478 980 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 MFSD14BQ5SR56 506 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 DACT2Q5SW24 774 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 SPTY2D1Q68D10 685 aaPredicted RBP9.17□□□□□ -0.94
CCDC93-207ENST00000474006 ZGPATQ8N5A5 531 aaKnown RBP9.17□□□□□ -0.94
CCDC93-207ENST00000474006 CERS5Q8N5B7 392 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 FSD1Q9BTV5 496 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 RAI14Q9P0K7 980 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 RNF181Q9P0P0 153 aa9.17□□□□□ -0.94
CCDC93-207ENST00000474006 GOLGB1Q14789 3259 aaKnown RBP9.17□□□□□ -0.94
CCDC93-207ENST00000474006 DUOX1Q9NRD9 1551 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 SALL1Q9NSC2 1324 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 RNF113AO15541 343 aaKnown RBP9.16□□□□□ -0.94
CCDC93-207ENST00000474006 ST18O60284 1047 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 CHGBP05060 677 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
CCDC93-207ENST00000474006 CHMLP26374 656 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 EIF6P56537 245 aaKnown RBP9.16□□□□□ -0.94
CCDC93-207ENST00000474006 FKBP1AP62942 108 aaKnown RBP9.16□□□□□ -0.94
CCDC93-207ENST00000474006 MAP3K12Q12852 859 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 TNIP1Q15025 636 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 SLFNL1Q499Z3 407 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 SLC9C2Q5TAH2 1124 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 PPP2R2DQ66LE6 453 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 CIAPIN1Q6FI81 312 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 TICAM2Q86XR7 235 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.16□□□□□ -0.941e-6■■□□□ 11.9
CCDC93-207ENST00000474006 LIMD1Q9UGP4 676 aa9.16□□□□□ -0.94
CCDC93-207ENST00000474006 A6NJR5 290 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 F8W031 263 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-207ENST00000474006 PRDX5P30044 214 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 EMP3P54852 163 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 MECOMQ03112 1051 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 LRRFIP1Q32MZ4 808 aaKnown RBP9.15□□□□□ -0.94
CCDC93-207ENST00000474006 ZSCAN25Q6NSZ9 544 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
CCDC93-207ENST00000474006 MAGEB6Q8N7X4 407 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 ZNF384Q8TF68 577 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 NSUN4Q96CB9 384 aaKnown RBP9.15□□□□□ -0.94
CCDC93-207ENST00000474006 GMLQ99445 158 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 SUGT1Q9Y2Z0 365 aa9.15□□□□□ -0.94
CCDC93-207ENST00000474006 COL1A1P02452 1464 aaPredicted RBP9.15□□□□□ -0.95
CCDC93-207ENST00000474006 ZNF532Q9HCE3 1301 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 TCRBV5S4A2TA0A5A2 114 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 HIP1O00291 1037 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 IGSF3O75054 1194 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 CDC45O75419 566 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 ZFYP08048 801 aaPredicted RBP9.14□□□□□ -0.95
CCDC93-207ENST00000474006 PDE6AP16499 860 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 CYP7A1P22680 504 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 ADD2P35612 726 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 USP46P62068 366 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 UBE3CQ15386 1083 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 NAA16Q6N069 864 aaPredicted RBP9.14□□□□□ -0.95
CCDC93-207ENST00000474006 CWC27Q6UX04 472 aaKnown RBP9.14□□□□□ -0.95
CCDC93-207ENST00000474006 KIAA0825Q8IV33 1275 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 ZNF687Q8N1G0 1237 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 RDH13Q8NBN7 331 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 BANK1Q8NDB2 785 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 FAM227BQ96M60 508 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 MRIQ9BWK5 157 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 TTF2Q9UNY4 1162 aaKnown RBP9.14□□□□□ -0.95
CCDC93-207ENST00000474006 GJA3Q9Y6H8 435 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 LRRC37AA6NMS7 1700 aa9.14□□□□□ -0.95
CCDC93-207ENST00000474006 LDHCP07864 332 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 RFC5P40937 340 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 SCNN1DP51172 638 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 GSTO1P78417 241 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 NMIQ13287 307 aaPredicted RBP9.13□□□□□ -0.95
CCDC93-207ENST00000474006 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 ZMYM1Q5SVZ6 1142 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 CASC1Q6TDU7 716 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
CCDC93-207ENST00000474006 OSBP2Q969R2 916 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
CCDC93-207ENST00000474006 SEC62Q99442 399 aaKnown RBP9.13□□□□□ -0.95
CCDC93-207ENST00000474006 PUS7LQ9H0K6 701 aaKnown RBP9.13□□□□□ -0.95
CCDC93-207ENST00000474006 DIAPH3Q9NSV4 1193 aa9.13□□□□□ -0.95
CCDC93-207ENST00000474006 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms