RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 PLAGL2Q9UPG8 496 aa6.84□□□□□ -1.31
GINS1-202ENST00000473460 RNGTTO60942 597 aaKnown RBP6.83□□□□□ -1.32
GINS1-202ENST00000473460 PRKCQQ04759 706 aa6.83□□□□□ -1.32
GINS1-202ENST00000473460 ZNF648Q5T619 568 aaPredicted RBP6.83□□□□□ -1.32
GINS1-202ENST00000473460 DTHD1Q6ZMT9 781 aa6.83□□□□□ -1.32
GINS1-202ENST00000473460 ISL2Q96A47 359 aa6.83□□□□□ -1.32
GINS1-202ENST00000473460 DMRTB1Q96MA1 342 aa6.83□□□□□ -1.32
GINS1-202ENST00000473460 MKNK2Q9HBH9 465 aa6.83□□□□□ -1.32
GINS1-202ENST00000473460 PCOLCE2Q9UKZ9 415 aa6.83□□□□□ -1.32
GINS1-202ENST00000473460 CEACAM5P06731 702 aa6.82□□□□□ -1.32
GINS1-202ENST00000473460 IFI16Q16666 785 aaKnown RBP6.82□□□□□ -1.32
GINS1-202ENST00000473460 ZC3H12AQ5D1E8 599 aaKnown RBP6.82□□□□□ -1.32
GINS1-202ENST00000473460 ATG4DQ86TL0 474 aaPredicted RBP6.82□□□□□ -1.32
GINS1-202ENST00000473460 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
GINS1-202ENST00000473460 KCNB2Q92953 911 aa6.82□□□□□ -1.32
GINS1-202ENST00000473460 RC3H2Q9HBD1 1191 aaKnown RBP6.82□□□□□ -1.32
GINS1-202ENST00000473460 CACNA2D2Q9NY47 1150 aa6.82□□□□□ -1.32
GINS1-202ENST00000473460 BIN1O00499 593 aa6.81□□□□□ -1.32
GINS1-202ENST00000473460 ZNF252P-AS1Q0IIN9 211 aa6.81□□□□□ -1.32
GINS1-202ENST00000473460 AOC3Q16853 763 aa6.81□□□□□ -1.32
GINS1-202ENST00000473460 FAM214BQ7L5A3 538 aa6.81□□□□□ -1.32
GINS1-202ENST00000473460 LRRN4CLQ8ND94 238 aa6.81□□□□□ -1.32
GINS1-202ENST00000473460 BCO2Q9BYV7 579 aa6.81□□□□□ -1.32
GINS1-202ENST00000473460 ERVK-24P63145 666 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 PPP2R3AQ06190 1150 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 MPRIPQ6WCQ1 1025 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 TMC7Q7Z402 723 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 TOP6BLQ8N6T0 577 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 GPBAR1Q8TDU6 330 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 FAM168AQ92567 244 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 HRASLS5Q96KN8 279 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 HEXIM2Q96MH2 286 aaKnown RBP6.8□□□□□ -1.32
GINS1-202ENST00000473460 TNKS2Q9H2K2 1166 aa6.8□□□□□ -1.32
GINS1-202ENST00000473460 ARNTP27540 789 aa6.79□□□□□ -1.32
GINS1-202ENST00000473460 NTF4P34130 210 aa6.79□□□□□ -1.32
GINS1-202ENST00000473460 MAP1SQ66K74 1059 aaPredicted RBP6.79□□□□□ -1.32
GINS1-202ENST00000473460 PI4K2BQ8TCG2 481 aa6.79□□□□□ -1.32
GINS1-202ENST00000473460 XRCC5P13010 732 aaKnown RBP6.78□□□□□ -1.32
GINS1-202ENST00000473460 NME2P22392 152 aa6.78□□□□□ -1.32
GINS1-202ENST00000473460 HNRNPUQ00839 825 aaKnown RBP eCLIP6.78□□□□□ -1.32
GINS1-202ENST00000473460 DSC3Q14574 896 aa6.78□□□□□ -1.32
GINS1-202ENST00000473460 ZNF124Q15973 351 aa6.78□□□□□ -1.32
GINS1-202ENST00000473460 NXPE4Q6UWF7 544 aa6.78□□□□□ -1.32
GINS1-202ENST00000473460 UBE3DQ7Z6J8 389 aa6.78□□□□□ -1.32
GINS1-202ENST00000473460 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
GINS1-202ENST00000473460 C3orf58Q8NDZ4 430 aa6.78□□□□□ -1.32
GINS1-202ENST00000473460 NLRP2Q9NX02 1062 aa6.78□□□□□ -1.32
GINS1-202ENST00000473460 TMEM265A0A087WTH1 108 aa6.77□□□□□ -1.33
GINS1-202ENST00000473460 SOWAHDA6NJG2 315 aa6.77□□□□□ -1.33
GINS1-202ENST00000473460 ITIH2P19823 946 aa6.77□□□□□ -1.33
GINS1-202ENST00000473460 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
GINS1-202ENST00000473460 RETREG2Q8NC44 543 aa6.77□□□□□ -1.33
GINS1-202ENST00000473460 PRDM7Q9NQW5 492 aa6.77□□□□□ -1.33
GINS1-202ENST00000473460 AKAP2Q9Y2D5 859 aa6.77□□□□□ -1.33
GINS1-202ENST00000473460 BMP6P22004 513 aa6.76□□□□□ -1.33
GINS1-202ENST00000473460 RING1Q06587 406 aa6.76□□□□□ -1.33
GINS1-202ENST00000473460 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
GINS1-202ENST00000473460 PPM1JQ5JR12 505 aa6.76□□□□□ -1.33
GINS1-202ENST00000473460 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
GINS1-202ENST00000473460 GRIN3AQ8TCU5 1115 aa6.76□□□□□ -1.33
GINS1-202ENST00000473460 TMEM40Q8WWA1 233 aa6.76□□□□□ -1.33
GINS1-202ENST00000473460 NECAB3Q96P71 396 aaPredicted RBP6.76□□□□□ -1.33
GINS1-202ENST00000473460 SSU72Q9NP77 194 aaKnown RBP6.76□□□□□ -1.33
GINS1-202ENST00000473460 PPP4R2Q9NY27 417 aa6.76□□□□□ -1.33
GINS1-202ENST00000473460 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
GINS1-202ENST00000473460 SLC23A3Q6PIS1 610 aa6.75□□□□□ -1.33
GINS1-202ENST00000473460 SPACA3Q8IXA5 215 aa6.75□□□□□ -1.33
GINS1-202ENST00000473460 CCER1Q8TC90 406 aaPredicted RBP6.75□□□□□ -1.33
GINS1-202ENST00000473460 EMILIN2Q9BXX0 1053 aa6.75□□□□□ -1.33
GINS1-202ENST00000473460 SNX11Q9Y5W9 270 aa6.75□□□□□ -1.33
GINS1-202ENST00000473460 CSADQ9Y600 493 aa6.75□□□□□ -1.33
GINS1-202ENST00000473460 PNMA6FA0A0J9YX94 578 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 IGF2BP3O00425 579 aaKnown RBP eCLIP6.74□□□□□ -1.33
GINS1-202ENST00000473460 ENC1O14682 589 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 PAGE1O75459 146 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 FARP2O94887 1054 aaPredicted RBP6.74□□□□□ -1.33
GINS1-202ENST00000473460 MESP2Q0VG99 397 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 ENOX2Q16206 610 aaKnown RBP6.74□□□□□ -1.33
GINS1-202ENST00000473460 NKPD1Q17RQ9 610 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 RASIP1Q5U651 963 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 FLAD1Q8NFF5 587 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 PRDM10Q9NQV6 1147 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
GINS1-202ENST00000473460 DCTN4Q9UJW0 460 aa6.74□□□□□ -1.33
GINS1-202ENST00000473460 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
GINS1-202ENST00000473460 DCDC2CA8MYV0 355 aa6.73□□□□□ -1.33
GINS1-202ENST00000473460 TREHO43280 583 aa6.73□□□□□ -1.33
GINS1-202ENST00000473460 EOMESO95936 686 aa6.73□□□□□ -1.33
GINS1-202ENST00000473460 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
GINS1-202ENST00000473460 KRTAP4-9Q9BYQ8 210 aa6.73□□□□□ -1.33
GINS1-202ENST00000473460 CBX8Q9HC52 389 aa6.73□□□□□ -1.33
GINS1-202ENST00000473460 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
GINS1-202ENST00000473460 SPOCD1Q6ZMY3 1216 aa6.72□□□□□ -1.33
GINS1-202ENST00000473460 C14orf37Q86TY3 774 aa6.72□□□□□ -1.33
GINS1-202ENST00000473460 C12orf40Q86WS4 652 aa6.72□□□□□ -1.33
GINS1-202ENST00000473460 ZNF503-AS2A6NEH8 195 aa6.71□□□□□ -1.34
GINS1-202ENST00000473460 TRIM37O94972 964 aa6.71□□□□□ -1.34
GINS1-202ENST00000473460 PLCB3Q01970 1234 aa6.71□□□□□ -1.34
GINS1-202ENST00000473460 ZBTB37Q5TC79 503 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms