RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 LY9Q9HBG7 655 aa24.34■■□□□ 1.49
COL18A1-207ENST00000473212 UBN2Q6ZU65 1347 aa24.34■■□□□ 1.49
COL18A1-207ENST00000473212 WDR19Q8NEZ3 1342 aa24.33■■□□□ 1.49
COL18A1-207ENST00000473212 PRKAB2O43741 272 aa24.33■■□□□ 1.49
COL18A1-207ENST00000473212 UBASH3AP57075 661 aa24.33■■□□□ 1.49
COL18A1-207ENST00000473212 GRIN1Q05586 938 aa24.33■■□□□ 1.49
COL18A1-207ENST00000473212 GNL2Q13823 731 aaKnown RBP24.33■■□□□ 1.49
COL18A1-207ENST00000473212 ZNF446Q9NWS9 450 aa24.33■■□□□ 1.49
COL18A1-207ENST00000473212 HPSEQ9Y251 543 aa24.33■■□□□ 1.49
COL18A1-207ENST00000473212 SERPINC1P01008 464 aa24.33■■□□□ 1.49
COL18A1-207ENST00000473212 STRBPQ96SI9 672 aaKnown RBP24.33■■□□□ 1.49
COL18A1-207ENST00000473212 DHX8Q14562 1220 aaKnown RBP24.32■■□□□ 1.48
COL18A1-207ENST00000473212 ARMT1Q9H993 441 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 FAM53CQ9NYF3 392 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 ZSWIM5Q9P217 1185 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 ZBTB43O43298 467 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 LONRF3Q496Y0 759 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 TMEM67Q5HYA8 995 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 AIDAQ96BJ3 306 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 SLC26A6Q9BXS9 759 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.32■■□□□ 1.481e-6■■□□□ 13.6
COL18A1-207ENST00000473212 ECM29Q5VYK3 1845 aa24.32■■□□□ 1.48
COL18A1-207ENST00000473212 GOLGA8AA7E2F4 631 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 SMIM22K7EJ46 135 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 STARD3NLO95772 234 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 MYL5Q02045 173 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 METTL16Q86W50 562 aaKnown RBP24.31■■□□□ 1.48
COL18A1-207ENST00000473212 MAGEB6Q8N7X4 407 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.31■■□□□ 1.48
COL18A1-207ENST00000473212 TMEM232C9JQI7 657 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 MBD4O95243 580 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 CFAP100Q494V2 611 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 RRP12Q5JTH9 1297 aaKnown RBP24.31■■□□□ 1.48
COL18A1-207ENST00000473212 DNAI1Q9UI46 699 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 KCNJ14Q9UNX9 436 aa24.31■■□□□ 1.48
COL18A1-207ENST00000473212 PPP6R2O75170 966 aa24.3■■□□□ 1.48
COL18A1-207ENST00000473212 IARSP41252 1262 aaKnown RBP24.3■■□□□ 1.48
COL18A1-207ENST00000473212 UBE3CQ15386 1083 aa24.3■■□□□ 1.48
COL18A1-207ENST00000473212 JMYQ8N9B5 988 aa24.3■■□□□ 1.48
COL18A1-207ENST00000473212 CDHR2Q9BYE9 1310 aa24.3■■□□□ 1.48
COL18A1-207ENST00000473212 ETF1P62495 437 aaKnown RBP24.3■■□□□ 1.48
COL18A1-207ENST00000473212 TERF2Q15554 542 aa24.3■■□□□ 1.48
COL18A1-207ENST00000473212 CDKL5O76039 1030 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 H2AFXP16104 143 aaPredicted RBP24.29■■□□□ 1.48
COL18A1-207ENST00000473212 BMP6P22004 513 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 PDE4BQ07343 736 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 RASGRF1Q13972 1273 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.29■■□□□ 1.48
COL18A1-207ENST00000473212 XIRP1Q702N8 1843 aaKnown RBP24.29■■□□□ 1.48
COL18A1-207ENST00000473212 BTBD18B2RXH4 712 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 CYP19A1P11511 503 aaPredicted RBP24.29■■□□□ 1.48
COL18A1-207ENST00000473212 RESP18Q5W5W9 173 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 SEC31BQ9NQW1 1179 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 ABCC12Q96J65 1359 aa24.29■■□□□ 1.48
COL18A1-207ENST00000473212 SOS2Q07890 1332 aaPredicted RBP24.29■■□□□ 1.48
COL18A1-207ENST00000473212 CBFA2T2O43439 604 aa24.28■■□□□ 1.48
COL18A1-207ENST00000473212 IFNL3Q8IZI9 196 aa24.28■■□□□ 1.48
COL18A1-207ENST00000473212 UTP14AQ9BVJ6 771 aaKnown RBP24.28■■□□□ 1.48
COL18A1-207ENST00000473212 ST7Q9NRC1 585 aa24.28■■□□□ 1.48
COL18A1-207ENST00000473212 ATRNO75882 1429 aa24.28■■□□□ 1.48
COL18A1-207ENST00000473212 IFIT3O14879 490 aaKnown RBP24.28■■□□□ 1.48
COL18A1-207ENST00000473212 TUBB4AP04350 444 aa24.28■■□□□ 1.48
COL18A1-207ENST00000473212 TOMM22Q9NS69 142 aa24.28■■□□□ 1.48
COL18A1-207ENST00000473212 FANCLQ9NW38 375 aa24.28■■□□□ 1.48
COL18A1-207ENST00000473212 ARID4AP29374 1257 aaPredicted RBP24.27■■□□□ 1.48
COL18A1-207ENST00000473212 CPLX2Q6PUV4 134 aaKnown RBP24.27■■□□□ 1.48
COL18A1-207ENST00000473212 OLFM4Q6UX06 510 aa24.27■■□□□ 1.48
COL18A1-207ENST00000473212 PCDHA5Q9Y5H7 936 aa24.27■■□□□ 1.48
COL18A1-207ENST00000473212 TTF1Q15361 905 aaPredicted RBP24.27■■□□□ 1.48
COL18A1-207ENST00000473212 ARHGAP29Q52LW3 1261 aa24.27■■□□□ 1.48
COL18A1-207ENST00000473212 VSTM4Q8IW00 320 aa24.27■■□□□ 1.48
COL18A1-207ENST00000473212 TMX1Q9H3N1 280 aa24.27■■□□□ 1.48
COL18A1-207ENST00000473212 SLAIN2Q9P270 581 aa24.27■■□□□ 1.48
COL18A1-207ENST00000473212 SLIT2O94813 1529 aa24.27■■□□□ 1.48
COL18A1-207ENST00000473212 CCP110O43303 1012 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 TOB1P50616 345 aaPredicted RBP24.26■■□□□ 1.47
COL18A1-207ENST00000473212 ZNF827Q17R98 1081 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 TRIM65Q6PJ69 517 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 GRAMD1CQ8IYS0 662 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 SPATA5Q8NB90 893 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 CNNM3Q8NE01 707 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 NAPBQ9H115 298 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 IQSEC3Q9UPP2 1182 aaPredicted RBP24.26■■□□□ 1.47
COL18A1-207ENST00000473212 FAM237AA0A1B0GTK4 181 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 FANCGO15287 622 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 TOP1P11387 765 aaKnown RBP24.26■■□□□ 1.47
COL18A1-207ENST00000473212 ATP2B1P20020 1258 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 CLCN6P51797 869 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 MIGA1Q8NAN2 632 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 RGS22Q8NE09 1264 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 PHLPP2Q6ZVD8 1323 aa24.26■■□□□ 1.47
COL18A1-207ENST00000473212 LCORLQ8N3X6 602 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 KCNH3Q9ULD8 1083 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 SLC12A7Q9Y666 1083 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 MYH3P11055 1940 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 GSG1L2A8MUP6 293 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 PDE8AO60658 829 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 FGFR2P21802 821 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 NR5A1Q13285 461 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 TRIM29Q14134 588 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms