RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
CCDC171-205ENST00000472806 MCM5P33992 734 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 IGHMBP2P38935 993 aaKnown RBP8.97□□□□□ -0.97
CCDC171-205ENST00000472806 SIK1P57059 783 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 PLCB2Q00722 1185 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 ST3GAL1Q11201 340 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 TRDNQ13061 729 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 NAA16Q6N069 864 aaPredicted RBP8.97□□□□□ -0.97
CCDC171-205ENST00000472806 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 RALYLQ86SE5 291 aaKnown RBP8.97□□□□□ -0.97
CCDC171-205ENST00000472806 NCOA7Q8NI08 942 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 SMARCC2Q8TAQ2 1214 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 BRF1Q92994 677 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 SEC62Q99442 399 aaKnown RBP8.97□□□□□ -0.97
CCDC171-205ENST00000472806 CDC5LQ99459 802 aaKnown RBP8.97□□□□□ -0.97
CCDC171-205ENST00000472806 MPHOSPH8Q99549 860 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 ZNF831Q5JPB2 1677 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.97□□□□□ -0.97
CCDC171-205ENST00000472806 NUP98P52948 1817 aa8.96□□□□□ -0.97
CCDC171-205ENST00000472806 ESPNB1AK53 854 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 M0R2C6 588 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 ZNF213O14771 459 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 ADAMTS2O95450 1211 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 ADORA1P30542 326 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 CLCN1P35523 988 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 ADD2P35612 726 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 ZAP70P43403 619 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 CRKLP46109 303 aaKnown RBP8.96□□□□□ -0.98
CCDC171-205ENST00000472806 EXOSC10Q01780 885 aaKnown RBP8.96□□□□□ -0.98
CCDC171-205ENST00000472806 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
CCDC171-205ENST00000472806 STK3Q13188 491 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 FOXD4L6Q3SYB3 417 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-205ENST00000472806 FOXD4L3Q6VB84 417 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-205ENST00000472806 VGLL2Q8N8G2 317 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 OSBP2Q969R2 916 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 ZNF396Q96N95 335 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-205ENST00000472806 SLC4A9Q96Q91 983 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 RBSNQ9H1K0 784 aa8.96□□□□□ -0.98
CCDC171-205ENST00000472806 SLIT2O94813 1529 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 ARAP2Q8WZ64 1704 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 GPAA1O43292 621 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 GADD45BO75293 160 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-205ENST00000472806 GNAT2P19087 354 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 MSNP26038 577 aaKnown RBP8.95□□□□□ -0.98
CCDC171-205ENST00000472806 EVCP57679 992 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 MAP3K12Q12852 859 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 INTS5Q6P9B9 1019 aaKnown RBP8.95□□□□□ -0.98
CCDC171-205ENST00000472806 BRICD5Q6PL45 260 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 CPLX2Q6PUV4 134 aaKnown RBP8.95□□□□□ -0.98
CCDC171-205ENST00000472806 STOX1Q6ZVD7 989 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 CDC37L1Q7L3B6 337 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 SPATA32Q96LK8 384 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 TCEANC2Q96MN5 208 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 CCDC85AQ96PX6 553 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-205ENST00000472806 GDPD2Q9HCC8 539 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 DDX19AQ9NUU7 478 aaKnown RBP8.95□□□□□ -0.98
CCDC171-205ENST00000472806 CCDC39Q9UFE4 941 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 ZMYM6O95789 1325 aa8.95□□□□□ -0.98
CCDC171-205ENST00000472806 LAMB2P55268 1798 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 MYH7P12883 1935 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 PTPDC1A2A3K4 754 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 CDKL5O76039 1030 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 CCDC192P0DO97 292 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 FGFR2P21802 821 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 MCAMP43121 646 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 SCRN1Q12765 414 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 ALX1Q15699 326 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 SLC9C2Q5TAH2 1124 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 SUSD4Q5VX71 490 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 CCDC102BQ68D86 513 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 ZSCAN30Q86W11 494 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 MARCH10Q8NA82 808 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-205ENST00000472806 HLA-CQ95604 372 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 PDLIM2Q96JY6 352 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
CCDC171-205ENST00000472806 TOR4AQ9NXH8 423 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 NSFL1CQ9UNZ2 370 aaKnown RBP8.94□□□□□ -0.98
CCDC171-205ENST00000472806 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC171-205ENST00000472806 TAF6LQ9Y6J9 622 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 UBN2Q6ZU65 1347 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
CCDC171-205ENST00000472806 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 PRC1O43663 620 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 IDH1O75874 414 aaKnown RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 FMNL1O95466 1100 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 CAVIN2O95810 425 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 FGAP02671 866 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 PDIA3P30101 505 aaKnown RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 APOBRQ0VD83 1088 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 RESTQ13127 1097 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 VPS72Q15906 364 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 MAP3K11Q16584 847 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 SMYD5Q6GMV2 418 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 TMED8Q6PL24 325 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-205ENST00000472806 SPATA5Q8NB90 893 aa8.93□□□□□ -0.98
CCDC171-205ENST00000472806 NSUN7Q8NE18 718 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms