RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, human

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZIC4-208	ENST00000472749	ASAP1	Q9ULH1	1129 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749		A0A087WUV0	522 aa	Predicted RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NUTM2E	B1AL46	878 aa	Predicted RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	ADAMTS2	O95450	1211 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	SLC26A6	Q9BXS9	759 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	ANKAR	Q7Z5J8	1434 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NBPF26	B4DH59	902 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	SLC3A2	P08195	630 aa	Known RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	ARID4A	P29374	1257 aa	Predicted RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NBPF14	Q5TI25	921 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	E4F1	Q66K89	784 aa	Predicted RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NBPF10	Q6P3W6	841 aa	Known RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	KIRREL3	Q8IZU9	778 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	CCDC24	Q8N4L8	307 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NBPF15	Q8N660	670 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	HAUS7	Q99871	368 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	COPRS	Q9NQ92	184 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	RBM28	Q9NW13	759 aa	Known RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	LRP2BP	Q9P2M1	347 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	COL15A1	P39059	1388 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	NPHP4	O75161	1426 aa	Predicted RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	AKAP17A	Q02040	695 aa	Known RBP	11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	REST	Q13127	1097 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	CNNM3	Q8NE01	707 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	CLIC4	Q9Y696	253 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	MED23	Q9ULK4	1368 aa		11.11	□□□□□ -0.63
ZIC4-208	ENST00000472749	IFIT3	O14879	490 aa	Known RBP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	FGA	P02671	866 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	NF2	P35240	595 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	GOLGA8F	Q08AF8	430 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	GOLGA8DP	Q0D2H9	430 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	SCARF1	Q14162	830 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	STX1A	Q16623	288 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	ALG1	Q9BT22	464 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	FUT8	Q9BYC5	575 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	ANO10	Q9NW15	660 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	IRAK4	Q9NWZ3	460 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	IFNK	Q9P0W0	207 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	MKRN1	Q9UHC7	482 aa	Known RBP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	DENND2A	Q9ULE3	1009 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	GPAA1	O43292	621 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	HMGB1	P09429	215 aa	Known RBP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	SFPQ	P23246	707 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	LRRC31	Q6UY01	552 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	TDRD7	Q8NHU6	1098 aa	Known RBP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	CPLX3	Q8WVH0	158 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	NAPB	Q9H115	298 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	SUGCT	Q9HAC7	445 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	TADA3	O75528	432 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	METAP2	P50579	478 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	TMEM67	Q5HYA8	995 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	NSUN7	Q8NE18	718 aa	Known RBP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	CTCFL	Q8NI51	663 aa	Predicted RBP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	PIK3R5	Q8WYR1	880 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	PUS7L	Q9H0K6	701 aa	Known RBP	11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	PSD3	Q9NYI0	1048 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	AKAP2	Q9Y2D5	859 aa		11.1	□□□□□ -0.63
ZIC4-208	ENST00000472749	TUBGCP6	Q96RT7	1819 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	MAST3	O60307	1309 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	PDIA3	P30101	505 aa	Known RBP	11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	ETF1	P62495	437 aa	Known RBP	11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	TICAM2	Q86XR7	235 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	IQUB	Q8NA54	791 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	NCOA7	Q8NI08	942 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	MRPS27	Q92552	414 aa	Known RBP	11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	SPTLC2	O15270	562 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	SKAP2	O75563	359 aa	Predicted RBP	11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	ITGA6	P23229	1130 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	PEX19	P40855	299 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	CTDSPL2	Q05D32	466 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	ZNF609	O15014	1411 aa		11.09	□□□□□ -0.63
ZIC4-208	ENST00000472749	ERICH2	A1L162	156 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	EFCAB8	A8MWE9	144 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	STARD3NL	O95772	234 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	NDUFA8	P51970	172 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	CCDC93	Q567U6	631 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	NBPF11	Q86T75	865 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	GOLPH3L	Q9H4A5	285 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	VEZT	Q9HBM0	779 aa		11.08	□□□□□ -0.63
ZIC4-208	ENST00000472749	UTY	O14607	1347 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	GOLGA8A	A7E2F4	631 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	ATP8B1	O43520	1251 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	CCT5	P48643	541 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	KCNQ4	P56696	695 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	SAFB	Q15424	915 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	CLIC6	Q96NY7	704 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	GNL3L	Q9NVN8	582 aa	Known RBP	11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	ANKRD18B	A2A2Z9	1011 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	RBM5	P52756	815 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	PPP2R3A	Q06190	1150 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	ARMC3	Q5W041	872 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	CEP57	Q86XR8	500 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	MIEF2	Q96C03	454 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	PCDHA7	Q9UN72	937 aa		11.08	□□□□□ -0.64
ZIC4-208	ENST00000472749	CAND2	O75155	1236 aa		11.07	□□□□□ -0.64
ZIC4-208	ENST00000472749	PRDM1	O75626	825 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms