RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
GCFC2-208ENST00000472230 ZNF622Q969S3 477 aaKnown RBP eCLIP21.46■■□□□ 1.03
GCFC2-208ENST00000472230 BAG3O95817 575 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 LIFRP42702 1097 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 KRT85P78386 507 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 CPLX2Q6PUV4 134 aaKnown RBP21.45■■□□□ 1.02
GCFC2-208ENST00000472230 ESR2Q92731 530 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 LY9Q9HBG7 655 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 QSER1Q2KHR3 1735 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 LAMB1P07942 1786 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 FOSBP53539 338 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 SGMS1Q86VZ5 419 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 MTA3Q9BTC8 594 aa21.45■■□□□ 1.02
GCFC2-208ENST00000472230 ZBTB43O43298 467 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 WTAPQ15007 396 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 CTR9Q6PD62 1173 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 APOA5Q6Q788 366 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 C2CD5Q86YS7 1000 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 TBC1D22AQ8WUA7 517 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 ZC3H12CQ9C0D7 883 aaKnown RBP21.44■■□□□ 1.02
GCFC2-208ENST00000472230 ZSCAN16Q9H4T2 348 aaPredicted RBP21.44■■□□□ 1.02
GCFC2-208ENST00000472230 USP17L12C9JPN9 530 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 USP17L21D6R901 530 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 RIMBP2O15034 1052 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 SLC3A2P08195 630 aaKnown RBP21.44■■□□□ 1.02
GCFC2-208ENST00000472230 PCP11498 1178 aaKnown RBP21.44■■□□□ 1.02
GCFC2-208ENST00000472230 DPP8Q6V1X1 898 aaPredicted RBP21.44■■□□□ 1.02
GCFC2-208ENST00000472230 UBAC1Q9BSL1 405 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 DCP1AQ9NPI6 582 aaPredicted RBP21.44■■□□□ 1.02
GCFC2-208ENST00000472230 ARPP21Q9UBL0 812 aaPredicted RBP21.44■■□□□ 1.02
GCFC2-208ENST00000472230 SLC12A7Q9Y666 1083 aa21.44■■□□□ 1.02
GCFC2-208ENST00000472230 MYH2Q9UKX2 1941 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 H0YIN7 160 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 CDKL5O76039 1030 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 USP5P45974 858 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 TMTC2Q8N394 836 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 CYP2D7A0A087X1C5 515 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 GOLGA8AA7E2F4 631 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 BAG6P46379 1132 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 MICU3Q86XE3 530 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 ZKSCAN3Q9BRR0 538 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 COA1Q9GZY4 146 aa21.43■■□□□ 1.02
GCFC2-208ENST00000472230 ISY1Q9ULR0 285 aaKnown RBP21.43■■□□□ 1.02
GCFC2-208ENST00000472230 MROH7-TTC4A0A0A0MT08 1334 aa21.42■■□□□ 1.02
GCFC2-208ENST00000472230 PPFIA3O75145 1194 aa21.42■■□□□ 1.02
GCFC2-208ENST00000472230 GADD45BO75293 160 aaPredicted RBP21.42■■□□□ 1.02
GCFC2-208ENST00000472230 MFSD14BQ5SR56 506 aa21.42■■□□□ 1.02
GCFC2-208ENST00000472230 SLF2Q8IX21 1173 aa21.42■■□□□ 1.02
GCFC2-208ENST00000472230 SYAP1Q96A49 352 aaPredicted RBP21.42■■□□□ 1.02
GCFC2-208ENST00000472230 SENP2Q9HC62 589 aa21.42■■□□□ 1.02
GCFC2-208ENST00000472230 ORC3Q9UBD5 711 aaPredicted RBP21.42■■□□□ 1.02
GCFC2-208ENST00000472230 G3V3G9 751 aa21.41■■□□□ 1.02
GCFC2-208ENST00000472230 DIXDC1Q155Q3 683 aa21.41■■□□□ 1.02
GCFC2-208ENST00000472230 GRIK5Q16478 980 aa21.41■■□□□ 1.02
GCFC2-208ENST00000472230 DCAF8Q5TAQ9 597 aa21.41■■□□□ 1.02
GCFC2-208ENST00000472230 CERS3Q8IU89 383 aa21.41■■□□□ 1.02
GCFC2-208ENST00000472230 UBE2HP62256 183 aa21.41■■□□□ 1.02
GCFC2-208ENST00000472230 RESTQ13127 1097 aa21.41■■□□□ 1.02
GCFC2-208ENST00000472230 RBM27Q9P2N5 1060 aaKnown RBP21.41■■□□□ 1.02
GCFC2-208ENST00000472230 RXRAP19793 462 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 SBK1Q52WX2 424 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 STYK1Q6J9G0 422 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 AMOTL1Q8IY63 956 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 EYA3Q99504 573 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 FAM205AQ6ZU69 1335 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 FSD2A1L4K1 749 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 RANBP6O60518 1105 aaKnown RBP21.4■■□□□ 1.02
GCFC2-208ENST00000472230 FDPSP14324 419 aaKnown RBP21.4■■□□□ 1.02
GCFC2-208ENST00000472230 PPP4CP60510 307 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 FAM173BQ6P4H8 233 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 FBXW7Q969H0 707 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 MCM9Q9NXL9 1143 aa21.4■■□□□ 1.02
GCFC2-208ENST00000472230 GTF2IP78347 998 aa21.39■■□□□ 1.02
GCFC2-208ENST00000472230 ZSCAN23Q3MJ62 389 aa21.39■■□□□ 1.02
GCFC2-208ENST00000472230 OLFM4Q6UX06 510 aa21.39■■□□□ 1.02
GCFC2-208ENST00000472230 CCDC144CPQ8IYA2 1237 aa21.39■■□□□ 1.02
GCFC2-208ENST00000472230 SH3RF3Q8TEJ3 882 aaPredicted RBP21.39■■□□□ 1.02
GCFC2-208ENST00000472230 C8orf76Q96K31 380 aa21.39■■□□□ 1.02
GCFC2-208ENST00000472230 ADD1P35611 737 aaKnown RBP21.39■■□□□ 1.01
GCFC2-208ENST00000472230 IQCA1Q86XH1 822 aa21.39■■□□□ 1.01
GCFC2-208ENST00000472230 MYL10Q9BUA6 226 aa21.39■■□□□ 1.01
GCFC2-208ENST00000472230 SCAND2PQ9GZW5 306 aaPredicted RBP21.39■■□□□ 1.01
GCFC2-208ENST00000472230 GUCY1B3Q02153 619 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 PDE4BQ07343 736 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 TPRNQ4KMQ1 711 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 NAV1Q8NEY1 1877 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 TNKSO95271 1327 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 MYH15Q9Y2K3 1946 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 SMIM22K7EJ46 135 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 FGRP09769 529 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 BTDP43251 543 aa21.38■■□□□ 1.01
GCFC2-208ENST00000472230 RTFDC1Q9BY42 306 aaPredicted RBP21.38■■□□□ 1.01
GCFC2-208ENST00000472230 PRDM1O75626 825 aa21.37■■□□□ 1.01
GCFC2-208ENST00000472230 PLCG2P16885 1265 aa21.37■■□□□ 1.01
GCFC2-208ENST00000472230 CDC27P30260 824 aa21.37■■□□□ 1.01
GCFC2-208ENST00000472230 ZSCAN10Q96SZ4 725 aaPredicted RBP21.37■■□□□ 1.01
GCFC2-208ENST00000472230 TMEM63CQ9P1W3 806 aa21.37■■□□□ 1.01
GCFC2-208ENST00000472230 ORC4O43929 436 aa21.36■■□□□ 1.01
GCFC2-208ENST00000472230 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
GCFC2-208ENST00000472230 ZNF445P59923 1031 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms