RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 UNCXA6NJT0 531 aa18.41■□□□□ 0.54
CALD1-215ENST00000472096 FAM151AQ8WW52 585 aa18.41■□□□□ 0.54
CALD1-215ENST00000472096 CLMNQ96JQ2 1002 aa18.41■□□□□ 0.54
CALD1-215ENST00000472096 CRBNQ96SW2 442 aa18.41■□□□□ 0.54
CALD1-215ENST00000472096 PIH1D3Q9NQM4 214 aaKnown RBP18.41■□□□□ 0.54
CALD1-215ENST00000472096 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.41■□□□□ 0.54
CALD1-215ENST00000472096 LDHCP07864 332 aa18.4■□□□□ 0.54
CALD1-215ENST00000472096 IFIT2P09913 472 aaKnown RBP18.4■□□□□ 0.54
CALD1-215ENST00000472096 TCP10Q12799 353 aa18.4■□□□□ 0.54
CALD1-215ENST00000472096 ANKRD13AQ8IZ07 590 aa18.4■□□□□ 0.54
CALD1-215ENST00000472096 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
CALD1-215ENST00000472096 PCDHB8Q9UN66 801 aa18.4■□□□□ 0.54
CALD1-215ENST00000472096 PCDHB13Q9Y5F0 798 aa18.4■□□□□ 0.54
CALD1-215ENST00000472096 CASP8AP2Q9UKL3 1982 aa18.4■□□□□ 0.54
CALD1-215ENST00000472096 SIPA1L1O43166 1804 aa18.39■□□□□ 0.54
CALD1-215ENST00000472096 CA12O43570 354 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 WDHD1O75717 1129 aaPredicted RBP18.39■□□□□ 0.53
CALD1-215ENST00000472096 RGS3P49796 1198 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 RHBDL3P58872 404 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 MKRN3Q13064 507 aaKnown RBP18.39■□□□□ 0.53
CALD1-215ENST00000472096 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.39■□□□□ 0.53
CALD1-215ENST00000472096 HOOK2Q96ED9 719 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 LRRCC1Q9C099 1032 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 PCDHB15Q9Y5E8 787 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 DOCK1Q14185 1865 aa18.39■□□□□ 0.53
CALD1-215ENST00000472096 ATAD5Q96QE3 1844 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 IGSF3O75054 1194 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 ENTPD3O75355 529 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 LBX1P52954 281 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 COL13A1Q5TAT6 717 aaPredicted RBP18.38■□□□□ 0.53
CALD1-215ENST00000472096 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 NAA16Q6N069 864 aaPredicted RBP18.38■□□□□ 0.53
CALD1-215ENST00000472096 WNK4Q96J92 1243 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 CSRNP1Q96S65 589 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 MYH1P12882 1939 aa18.38■□□□□ 0.53
CALD1-215ENST00000472096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.37■□□□□ 0.53
CALD1-215ENST00000472096 C19orf67A6NJJ6 358 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 STK25O00506 426 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 DCAF15Q66K64 600 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.37■□□□□ 0.53
CALD1-215ENST00000472096 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
CALD1-215ENST00000472096 ZFPM1Q8IX07 1006 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
CALD1-215ENST00000472096 SLC10A4Q96EP9 437 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 ZFP91Q96JP5 570 aaPredicted RBP18.37■□□□□ 0.53
CALD1-215ENST00000472096 ANTXR1Q9H6X2 564 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 DCTPP1Q9H773 170 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 DDX4Q9NQI0 724 aaKnown RBP18.37■□□□□ 0.53
CALD1-215ENST00000472096 ATRNL1Q5VV63 1379 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 COL2A1P02458 1487 aaPredicted RBP18.37■□□□□ 0.53
CALD1-215ENST00000472096 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
CALD1-215ENST00000472096 MAP3K13O43283 966 aa18.36■□□□□ 0.53
CALD1-215ENST00000472096 SMARCA5O60264 1052 aaPredicted RBP18.36■□□□□ 0.53
CALD1-215ENST00000472096 MAP4K4O95819 1239 aaPredicted RBP18.36■□□□□ 0.53
CALD1-215ENST00000472096 ZBTB48P10074 688 aaPredicted RBP18.36■□□□□ 0.53
CALD1-215ENST00000472096 PICALMQ13492 652 aa18.36■□□□□ 0.53
CALD1-215ENST00000472096 VGLL4Q14135 290 aa18.36■□□□□ 0.53
CALD1-215ENST00000472096 DDX60LQ5H9U9 1706 aaKnown RBP18.36■□□□□ 0.53
CALD1-215ENST00000472096 ADGRA1Q86SQ6 560 aa18.36■□□□□ 0.53
CALD1-215ENST00000472096 KIF12Q96FN5 646 aa18.36■□□□□ 0.53
CALD1-215ENST00000472096 ELP3Q9H9T3 547 aa18.36■□□□□ 0.53
CALD1-215ENST00000472096 SAGE1Q9NXZ1 904 aa18.36■□□□□ 0.53
CALD1-215ENST00000472096 IDH1O75874 414 aaKnown RBP18.35■□□□□ 0.53
CALD1-215ENST00000472096 GJA5P36382 358 aa18.35■□□□□ 0.53
CALD1-215ENST00000472096 MAP3K9P80192 1104 aa18.35■□□□□ 0.53
CALD1-215ENST00000472096 PHF12Q96QT6 1004 aa18.35■□□□□ 0.53
CALD1-215ENST00000472096 WRNIP1Q96S55 665 aa18.35■□□□□ 0.53
CALD1-215ENST00000472096 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
CALD1-215ENST00000472096 ZNF341Q9BYN7 854 aa18.35■□□□□ 0.53
CALD1-215ENST00000472096 CSADQ9Y600 493 aa18.35■□□□□ 0.53
CALD1-215ENST00000472096 PTPRFP10586 1907 aa18.34■□□□□ 0.53
CALD1-215ENST00000472096 SREBF2Q12772 1141 aa18.34■□□□□ 0.53
CALD1-215ENST00000472096 MIGA2Q7L4E1 593 aa18.34■□□□□ 0.53
CALD1-215ENST00000472096 SH3BP5LQ7L8J4 393 aa18.34■□□□□ 0.53
CALD1-215ENST00000472096 RNF186Q9NXI6 227 aa18.34■□□□□ 0.53
CALD1-215ENST00000472096 AATFQ9NY61 560 aaKnown RBP eCLIP18.34■□□□□ 0.53
CALD1-215ENST00000472096 PHIPQ8WWQ0 1821 aa18.34■□□□□ 0.53
CALD1-215ENST00000472096 DDTLA6NHG4 134 aaPredicted RBP18.33■□□□□ 0.52
CALD1-215ENST00000472096 BAG3O95817 575 aa18.33■□□□□ 0.52
CALD1-215ENST00000472096 TM4SF4P48230 202 aa18.33■□□□□ 0.52
CALD1-215ENST00000472096 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
CALD1-215ENST00000472096 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
CALD1-215ENST00000472096 TEX11Q8IYF3 940 aa18.33■□□□□ 0.52
CALD1-215ENST00000472096 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.52
CALD1-215ENST00000472096 SH3RF3Q8TEJ3 882 aaPredicted RBP18.33■□□□□ 0.52
CALD1-215ENST00000472096 OPTNQ96CV9 577 aa18.33■□□□□ 0.52
CALD1-215ENST00000472096 DNAJC2Q99543 621 aaKnown RBP18.33■□□□□ 0.52
CALD1-215ENST00000472096 SNCAIPQ9Y6H5 919 aa18.33■□□□□ 0.52
CALD1-215ENST00000472096 MANSC4A6NHS7 340 aaPredicted RBP18.32■□□□□ 0.52
CALD1-215ENST00000472096 TRPA1O75762 1119 aa18.32■□□□□ 0.52
CALD1-215ENST00000472096 PLCG2P16885 1265 aa18.32■□□□□ 0.52
CALD1-215ENST00000472096 ATP5JP18859 108 aa18.32■□□□□ 0.52
CALD1-215ENST00000472096 CYP7A1P22680 504 aa18.32■□□□□ 0.52
CALD1-215ENST00000472096 PPP4CP60510 307 aa18.32■□□□□ 0.52
CALD1-215ENST00000472096 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
CALD1-215ENST00000472096 OSBPL5Q9H0X9 879 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms