RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TTC22Q5TAA0 569 aa14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 WDR66Q8TBY9 1149 aa14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 VPS16Q9H269 839 aa14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NCAPH2Q6IBW4 605 aa14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PDE6AP16499 860 aa14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ZNF131P52739 623 aa14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 UTP14CQ5TAP6 766 aaKnown RBP14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NSMFQ6X4W1 530 aa14.77□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TNFAIP3P21580 790 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NMIQ13287 307 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SH2D4BQ5SQS7 431 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SV2BQ7L1I2 683 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PPP1R12CQ9BZL4 782 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SAMD15Q9P1V8 674 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ARHGEF35A5YM69 484 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ITKQ08881 620 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MUM1L1Q5H9M0 696 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PLEKHA4Q9H4M7 779 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 AATFQ9NY61 560 aaKnown RBP eCLIP14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 IFNKQ9P0W0 207 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 IDI1Q13907 227 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 RBM17Q96I25 401 aaKnown RBP14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 AZI2Q9H6S1 392 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 VAV2P52735 878 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GPR161Q8N6U8 529 aaKnown RBP14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ARHGEF2Q92974 986 aaKnown RBP14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MED10Q9BTT4 135 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TXKP42681 527 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 BEND3Q5T5X7 828 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NKIRAS1Q9NYS0 192 aa14.76□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TCIRG1Q13488 830 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 FAM89AQ96GI7 184 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 LUC7L2Q9Y383 392 aaKnown RBP14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 BZW2Q9Y6E2 419 aaKnown RBP14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PRPF6O94906 941 aaKnown RBP14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ANKRD12Q6UB98 2062 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 IRX3P78415 501 aaPredicted RBP14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SPAG1Q07617 926 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CFBP00751 764 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NOC4LQ9BVI4 516 aaKnown RBP14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CARD10Q9BWT7 1032 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ESYT2A0FGR8 921 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GCNT3O95395 438 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 STMN1P16949 149 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 IL15P40933 162 aaPredicted RBP14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GTF2A1P52655 376 aaPredicted RBP14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SPATA17Q96L03 361 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TXNDC9O14530 226 aa14.75□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TFCP2Q12800 502 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 A0A1B0GVL5 298 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SPECC1L-ADORA2AF8WAN1 911 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CIB2O75838 187 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SAT1P21673 171 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ATP2A3Q93084 1043 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 STK32BQ9NY57 414 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 RPS6KA2Q15349 733 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NAP1L4Q99733 375 aaKnown RBP14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 BTG4Q9NY30 223 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 IGSF3O75054 1194 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 IL2RBP14784 551 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SESTD1Q86VW0 696 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GOLGA6CA6NDK9 693 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GOLGA6BA6NDN3 693 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 H0YIN7 160 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GOLGA6DP0CG33 693 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ZNF365Q70YC5 407 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GLG1Q92896 1179 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GOLGA6AQ9NYA3 693 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MYO1AQ9UBC5 1043 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 STK24Q9Y6E0 443 aa14.74□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 FAM135AQ9P2D6 1515 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MBD4O95243 580 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 OATP04181 439 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 HSPA2P54652 639 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PDE4DQ08499 809 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SH2D4AQ9H788 454 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 B4E1Z4 1266 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NEDD9Q14511 834 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GNAT2P19087 354 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MYCT1Q8N699 235 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PARD3BQ8TEW8 1205 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ERCC6LQ2NKX8 1250 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CSRNP2Q9H175 543 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SLC12A2P55011 1212 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 Q3C1V9 767 aa14.73□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PIK3AP1Q6ZUJ8 805 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TTC6Q86TZ1 520 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GRIN2BQ13224 1484 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 hCG_1642624A0A1W2PR95 340 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TNNI1P19237 187 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 DNM2P50570 870 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 LRMPQ12912 555 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms