RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 FLT1P17948 1338 aa18.34■□□□□ 0.53
COMMD6-208ENST00000471682 USP5P45974 858 aa18.34■□□□□ 0.53
COMMD6-208ENST00000471682 MFAP1P55081 439 aaKnown RBP18.34■□□□□ 0.53
COMMD6-208ENST00000471682 FKBP1BP68106 108 aa18.34■□□□□ 0.53
COMMD6-208ENST00000471682 TGFBRAP1Q8WUH2 860 aa18.34■□□□□ 0.53
COMMD6-208ENST00000471682 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
COMMD6-208ENST00000471682 RAD50Q92878 1312 aa18.33■□□□□ 0.53
COMMD6-208ENST00000471682 M0R2C6 588 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 TRAF5O00463 557 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 CHMLP26374 656 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 TCP10Q12799 353 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 NMIQ13287 307 aaPredicted RBP18.33■□□□□ 0.52
COMMD6-208ENST00000471682 PICALMQ13492 652 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 DDRGK1Q96HY6 314 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 TMEM39BQ9GZU3 492 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 CDK5RAP2Q96SN8 1893 aa18.33■□□□□ 0.52
COMMD6-208ENST00000471682 A0A0D9SFI3 127 aa18.32■□□□□ 0.52
COMMD6-208ENST00000471682 MAPKAPK5Q8IW41 473 aa18.32■□□□□ 0.52
COMMD6-208ENST00000471682 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
COMMD6-208ENST00000471682 SEC62Q99442 399 aaKnown RBP18.32■□□□□ 0.52
COMMD6-208ENST00000471682 DCP1AQ9NPI6 582 aaPredicted RBP18.32■□□□□ 0.52
COMMD6-208ENST00000471682 SLC4A4Q9Y6R1 1079 aa18.32■□□□□ 0.52
COMMD6-208ENST00000471682 TRPM7Q96QT4 1865 aa18.32■□□□□ 0.52
COMMD6-208ENST00000471682 UNCXA6NJT0 531 aa18.31■□□□□ 0.52
COMMD6-208ENST00000471682 PATL2C9JE40 543 aaKnown RBP18.31■□□□□ 0.52
COMMD6-208ENST00000471682 C1QTNF8P60827 252 aa18.31■□□□□ 0.52
COMMD6-208ENST00000471682 MAP3K10Q02779 954 aa18.31■□□□□ 0.52
COMMD6-208ENST00000471682 NBPF12Q5TAG4 269 aaPredicted RBP18.31■□□□□ 0.52
COMMD6-208ENST00000471682 CWC27Q6UX04 472 aaKnown RBP18.31■□□□□ 0.52
COMMD6-208ENST00000471682 ZFPM1Q8IX07 1006 aa18.31■□□□□ 0.52
COMMD6-208ENST00000471682 PI4KBQ9UBF8 816 aa18.31■□□□□ 0.52
COMMD6-208ENST00000471682 SCAF8Q9UPN6 1271 aaKnown RBP18.31■□□□□ 0.52
COMMD6-208ENST00000471682 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 GSG1L2A8MUP6 293 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 PPP1R12BO60237 982 aaPredicted RBP18.3■□□□□ 0.52
COMMD6-208ENST00000471682 TBC1D12O60347 775 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 CELF2O95319 508 aaKnown RBP18.3■□□□□ 0.52
COMMD6-208ENST00000471682 APLP1P51693 650 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 MAP3K11Q16584 847 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 CST9Q5W186 159 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 DCAF15Q66K64 600 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 SH3BP5LQ7L8J4 393 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 TTC6Q86TZ1 520 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 FOXP4Q8IVH2 680 aaPredicted RBP18.3■□□□□ 0.52
COMMD6-208ENST00000471682 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
COMMD6-208ENST00000471682 SDR42E1Q8WUS8 393 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 CSRNP1Q96S65 589 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 NACAP1Q9BZK3 213 aa18.3■□□□□ 0.52
COMMD6-208ENST00000471682 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
COMMD6-208ENST00000471682 TMEM88BA6NKF7 163 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 PRKAB2O43741 272 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 HLA-DOAP06340 250 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 PRAMEF18Q5VWM3 479 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 METTL16Q86W50 562 aaKnown RBP18.29■□□□□ 0.52
COMMD6-208ENST00000471682 AMOTL1Q8IY63 956 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 C2orf69Q8N8R5 385 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 EHD4Q9H223 541 aa18.29■□□□□ 0.52
COMMD6-208ENST00000471682 GBA2Q9HCG7 927 aaPredicted RBP18.29■□□□□ 0.52
COMMD6-208ENST00000471682 CDC45O75419 566 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 ALX1Q15699 326 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 DLK2Q6UY11 383 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 ARMC9Q7Z3E5 817 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 CREBZFQ9NS37 354 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 ARPP21Q9UBL0 812 aaPredicted RBP18.28■□□□□ 0.52
COMMD6-208ENST00000471682 HERC5Q9UII4 1024 aaKnown RBP18.28■□□□□ 0.52
COMMD6-208ENST00000471682 SSC5DA1L4H1 1573 aa18.28■□□□□ 0.52
COMMD6-208ENST00000471682 PAPPA2Q9BXP8 1791 aa18.27■□□□□ 0.52
COMMD6-208ENST00000471682 ZMYM6O95789 1325 aa18.27■□□□□ 0.52
COMMD6-208ENST00000471682 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.52
COMMD6-208ENST00000471682 SGSM2O43147 1006 aa18.27■□□□□ 0.52
COMMD6-208ENST00000471682 FMR1Q06787 632 aaKnown RBP eCLIP18.27■□□□□ 0.52
COMMD6-208ENST00000471682 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.52
COMMD6-208ENST00000471682 CDAN1Q8IWY9 1227 aa18.27■□□□□ 0.52
COMMD6-208ENST00000471682 IFNL3Q8IZI9 196 aa18.27■□□□□ 0.52
COMMD6-208ENST00000471682 PALD1Q9ULE6 856 aa18.27■□□□□ 0.52
COMMD6-208ENST00000471682 MYH1P12882 1939 aa18.27■□□□□ 0.51
COMMD6-208ENST00000471682 POLR3DP05423 398 aaPredicted RBP18.26■□□□□ 0.51
COMMD6-208ENST00000471682 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
COMMD6-208ENST00000471682 IREB2P48200 963 aaKnown RBP18.26■□□□□ 0.51
COMMD6-208ENST00000471682 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
COMMD6-208ENST00000471682 HHIPL1Q96JK4 782 aa18.26■□□□□ 0.51
COMMD6-208ENST00000471682 DSCC1Q9BVC3 393 aa18.26■□□□□ 0.51
COMMD6-208ENST00000471682 ZNF341Q9BYN7 854 aa18.26■□□□□ 0.51
COMMD6-208ENST00000471682 ZNF408Q9H9D4 720 aa18.26■□□□□ 0.51
COMMD6-208ENST00000471682 ZNF112Q9UJU3 913 aa18.26■□□□□ 0.51
COMMD6-208ENST00000471682 NAV1Q8NEY1 1877 aa18.26■□□□□ 0.51
COMMD6-208ENST00000471682 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
COMMD6-208ENST00000471682 APPP05067 770 aa18.25■□□□□ 0.51
COMMD6-208ENST00000471682 HSPA6P17066 643 aa18.25■□□□□ 0.51
COMMD6-208ENST00000471682 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
COMMD6-208ENST00000471682 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
COMMD6-208ENST00000471682 EPB41L4AQ9HCS5 686 aaPredicted RBP18.25■□□□□ 0.51
COMMD6-208ENST00000471682 SAP30BPQ9UHR5 308 aaKnown RBP18.25■□□□□ 0.51
COMMD6-208ENST00000471682 SERPINB13Q9UIV8 391 aa18.25■□□□□ 0.51
COMMD6-208ENST00000471682 TLL2Q9Y6L7 1015 aa18.25■□□□□ 0.51
COMMD6-208ENST00000471682 USP17L12C9JPN9 530 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms