RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 ANKRD13AQ8IZ07 590 aa18.42■□□□□ 0.54
ABCF3-208ENST00000471226 OTUD7AQ8TE49 926 aaPredicted RBP18.42■□□□□ 0.54
ABCF3-208ENST00000471226 WBP1LQ9NX94 342 aa18.42■□□□□ 0.54
ABCF3-208ENST00000471226 ATRNL1Q5VV63 1379 aa18.42■□□□□ 0.54
ABCF3-208ENST00000471226 HSPA1AP0DMV8 641 aaKnown RBP18.41■□□□□ 0.54
ABCF3-208ENST00000471226 HSPA1BP0DMV9 641 aaKnown RBP18.41■□□□□ 0.54
ABCF3-208ENST00000471226 PDE6AP16499 860 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 DYNLL1P63167 89 aaKnown RBP18.41■□□□□ 0.54
ABCF3-208ENST00000471226 MAP2K1Q02750 393 aaPredicted RBP18.41■□□□□ 0.54
ABCF3-208ENST00000471226 PICALMQ13492 652 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 SLC9C2Q5TAH2 1124 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 IFFO2Q5TF58 517 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 TSHZ3Q63HK5 1081 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 DCAF15Q66K64 600 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.41■□□□□ 0.54
ABCF3-208ENST00000471226 CERS3Q8IU89 383 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.41■□□□□ 0.54
ABCF3-208ENST00000471226 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 CLMNQ96JQ2 1002 aa18.41■□□□□ 0.54
ABCF3-208ENST00000471226 ZBTB47Q9UFB7 747 aaPredicted RBP18.41■□□□□ 0.54
ABCF3-208ENST00000471226 SIPA1L1O43166 1804 aa18.4■□□□□ 0.54
ABCF3-208ENST00000471226 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
ABCF3-208ENST00000471226 DDTLA6NHG4 134 aaPredicted RBP18.4■□□□□ 0.54
ABCF3-208ENST00000471226 MAP3K9P80192 1104 aa18.4■□□□□ 0.54
ABCF3-208ENST00000471226 KIF23Q02241 960 aaPredicted RBP18.4■□□□□ 0.54
ABCF3-208ENST00000471226 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
ABCF3-208ENST00000471226 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
ABCF3-208ENST00000471226 SLC10A4Q96EP9 437 aa18.4■□□□□ 0.54
ABCF3-208ENST00000471226 OSBPL5Q9H0X9 879 aaPredicted RBP18.4■□□□□ 0.54
ABCF3-208ENST00000471226 ZNF532Q9HCE3 1301 aa18.4■□□□□ 0.54
ABCF3-208ENST00000471226 MX1P20591 662 aa18.39■□□□□ 0.53
ABCF3-208ENST00000471226 ADD2P35612 726 aa18.39■□□□□ 0.53
ABCF3-208ENST00000471226 MIGA2Q7L4E1 593 aa18.39■□□□□ 0.53
ABCF3-208ENST00000471226 CSRNP1Q96S65 589 aa18.39■□□□□ 0.53
ABCF3-208ENST00000471226 RIOK1Q9BRS2 568 aaKnown RBP18.39■□□□□ 0.53
ABCF3-208ENST00000471226 ZNF341Q9BYN7 854 aa18.39■□□□□ 0.53
ABCF3-208ENST00000471226 ZNF112Q9UJU3 913 aa18.39■□□□□ 0.53
ABCF3-208ENST00000471226 ERC2O15083 957 aa18.38■□□□□ 0.53
ABCF3-208ENST00000471226 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
ABCF3-208ENST00000471226 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
ABCF3-208ENST00000471226 ZSCAN29Q8IWY8 852 aaPredicted RBP18.38■□□□□ 0.53
ABCF3-208ENST00000471226 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.38■□□□□ 0.533e-6■■■■■ 34.1
ABCF3-208ENST00000471226 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
ABCF3-208ENST00000471226 NUCB1Q02818 461 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 VGLL4Q14135 290 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 UBE3CQ15386 1083 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
ABCF3-208ENST00000471226 KBTBD3Q8NAB2 608 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 WNK4Q96J92 1243 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 WRNIP1Q96S55 665 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 FLT1P17948 1338 aa18.37■□□□□ 0.53
ABCF3-208ENST00000471226 MAGEB6P1A0A0J9YX57 407 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 TBC1D12O60347 775 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 ZBTB48P10074 688 aaPredicted RBP18.36■□□□□ 0.53
ABCF3-208ENST00000471226 PDE1AP54750 535 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 DDX60LQ5H9U9 1706 aaKnown RBP18.36■□□□□ 0.53
ABCF3-208ENST00000471226 ZSCAN25Q6NSZ9 544 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 CHD1LQ86WJ1 897 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 MAPKAPK5Q8IW41 473 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 NAV1Q8NEY1 1877 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 LNPKQ9C0E8 428 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 DHX36Q9H2U1 1008 aaKnown RBP18.36■□□□□ 0.53
ABCF3-208ENST00000471226 ELP3Q9H9T3 547 aa18.36■□□□□ 0.53
ABCF3-208ENST00000471226 FOXN1O15353 648 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 CHGBP05060 677 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 INPP5BP32019 993 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 GJA5P36382 358 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 SLFNL1Q499Z3 407 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 ZKSCAN4Q969J2 545 aaPredicted RBP18.35■□□□□ 0.53
ABCF3-208ENST00000471226 CSADQ9Y600 493 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 DOCK1Q14185 1865 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
ABCF3-208ENST00000471226 PHF20L1A8MW92 1017 aa18.34■□□□□ 0.53
ABCF3-208ENST00000471226 SLURP2P0DP57 97 aa18.34■□□□□ 0.53
ABCF3-208ENST00000471226 TM4SF4P48230 202 aa18.34■□□□□ 0.53
ABCF3-208ENST00000471226 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
ABCF3-208ENST00000471226 AIDAQ96BJ3 306 aa18.34■□□□□ 0.53
ABCF3-208ENST00000471226 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
ABCF3-208ENST00000471226 BAZ2AQ9UIF9 1905 aaKnown RBP18.33■□□□□ 0.53
ABCF3-208ENST00000471226 PHIPQ8WWQ0 1821 aa18.33■□□□□ 0.53
ABCF3-208ENST00000471226 SPDYE5A6NIY4 337 aa18.33■□□□□ 0.52
ABCF3-208ENST00000471226 NOL9Q5SY16 702 aaKnown RBP18.33■□□□□ 0.52
ABCF3-208ENST00000471226 LCORLQ8N3X6 602 aa18.33■□□□□ 0.52
ABCF3-208ENST00000471226 OPTNQ96CV9 577 aa18.33■□□□□ 0.52
ABCF3-208ENST00000471226 BEGAINQ9BUH8 593 aa18.33■□□□□ 0.52
ABCF3-208ENST00000471226 PI4KBQ9UBF8 816 aa18.33■□□□□ 0.52
ABCF3-208ENST00000471226 CA12O43570 354 aa18.32■□□□□ 0.52
ABCF3-208ENST00000471226 USP5P45974 858 aa18.32■□□□□ 0.52
ABCF3-208ENST00000471226 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
ABCF3-208ENST00000471226 ERO1BQ86YB8 467 aa18.32■□□□□ 0.52
ABCF3-208ENST00000471226 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
ABCF3-208ENST00000471226 CRNKL1Q9BZJ0 848 aaKnown RBP18.32■□□□□ 0.52
ABCF3-208ENST00000471226 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
ABCF3-208ENST00000471226 HERC5Q9UII4 1024 aaKnown RBP18.32■□□□□ 0.52
ABCF3-208ENST00000471226 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
ABCF3-208ENST00000471226 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-208ENST00000471226 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms