RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 NECTIN1Q15223 517 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 DACT2Q5SW24 774 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 VPS37DQ86XT2 251 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 FAM227BQ96M60 508 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 TBC1D2Q9BYX2 928 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
PTPRE-207ENST00000471218 TNRC18O15417 2968 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 K7ELQ4 463 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
PTPRE-207ENST00000471218 CYP2E1P05181 493 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 HMGB1P09429 215 aaKnown RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 ZBTB48P10074 688 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 HIBADHP31937 336 aaKnown RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 NBPF9Q3BBW0 867 aa10.91□□□□□ -0.66
PTPRE-207ENST00000471218 SPTY2D1Q68D10 685 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 ZNF804AQ7Z570 1209 aa10.91□□□□□ -0.66
PTPRE-207ENST00000471218 HELBQ8NG08 1087 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 SLC10A4Q96EP9 437 aa10.91□□□□□ -0.66
PTPRE-207ENST00000471218 FAM84BQ96KN1 310 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 ALDH8A1Q9H2A2 487 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-207ENST00000471218 ASTN2O75129 1339 aaPredicted RBP10.9□□□□□ -0.66
PTPRE-207ENST00000471218 COL1A1P02452 1464 aaPredicted RBP10.9□□□□□ -0.66
PTPRE-207ENST00000471218 DLGAP5Q15398 846 aa10.9□□□□□ -0.66
PTPRE-207ENST00000471218 ALX1Q15699 326 aa10.9□□□□□ -0.66
PTPRE-207ENST00000471218 LDLRAD1Q5T700 205 aa10.9□□□□□ -0.66
PTPRE-207ENST00000471218 WDR66Q8TBY9 1149 aa10.9□□□□□ -0.66
PTPRE-207ENST00000471218 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
PTPRE-207ENST00000471218 IL25Q9H293 177 aa10.9□□□□□ -0.66
PTPRE-207ENST00000471218 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
PTPRE-207ENST00000471218 RBM8AQ9Y5S9 174 aaKnown RBP10.9□□□□□ -0.66
PTPRE-207ENST00000471218 MAST3O60307 1309 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
PTPRE-207ENST00000471218 PDE6AP16499 860 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 BCAMP50895 628 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 FKBP1AP62942 108 aaKnown RBP10.89□□□□□ -0.67
PTPRE-207ENST00000471218 ANKRD1Q15327 319 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 MAP3K11Q16584 847 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 SLC9C2Q5TAH2 1124 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 SPRYD7Q5W111 196 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 CREB3L3Q68CJ9 461 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 ZNF589Q86UQ0 364 aaPredicted RBP10.89□□□□□ -0.67
PTPRE-207ENST00000471218 MTMR14Q8NCE2 650 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 TBC1D22AQ8WUA7 517 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 EDC3Q96F86 508 aaKnown RBP10.89□□□□□ -0.67
PTPRE-207ENST00000471218 ERO1AQ96HE7 468 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 SUGT1Q9Y2Z0 365 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 SNX14Q9Y5W7 946 aa10.89□□□□□ -0.67
PTPRE-207ENST00000471218 DOCK2Q92608 1830 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 SCN9AQ15858 1988 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 TCRBV5S4A2TA0A5A2 114 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 PDIA4P13667 645 aaKnown RBP10.88□□□□□ -0.67
PTPRE-207ENST00000471218 IL1R1P14778 569 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 IREB2P48200 963 aaKnown RBP10.88□□□□□ -0.67
PTPRE-207ENST00000471218 TNFAIP1Q13829 316 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 VPS53Q5VIR6 699 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 GIMAP6Q6P9H5 292 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 FBXL16Q8N461 479 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 TDRD7Q8NHU6 1098 aaKnown RBP10.88□□□□□ -0.67
PTPRE-207ENST00000471218 OSBP2Q969R2 916 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 CHMP4CQ96CF2 233 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 INTS4Q96HW7 963 aaKnown RBP10.88□□□□□ -0.67
PTPRE-207ENST00000471218 DEFB129Q9H1M3 183 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 ANTXR1Q9H6X2 564 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 PIH1D3Q9NQM4 214 aaKnown RBP10.88□□□□□ -0.67
PTPRE-207ENST00000471218 ANGEL1Q9UNK9 670 aaKnown RBP10.88□□□□□ -0.67
PTPRE-207ENST00000471218 COL4A1P02462 1669 aa10.88□□□□□ -0.67
PTPRE-207ENST00000471218 WDR19Q8NEZ3 1342 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 PSME4Q14997 1843 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 SLC27A2O14975 620 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 IDH1O75874 414 aaKnown RBP10.87□□□□□ -0.67
PTPRE-207ENST00000471218 HSPD1P10809 573 aaKnown RBP10.87□□□□□ -0.67
PTPRE-207ENST00000471218 GTF2IP78347 998 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 GSTO1P78417 241 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 PTH1RQ03431 593 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 KIAA0825Q8IV33 1275 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 CWC22Q9HCG8 908 aaKnown RBP10.87□□□□□ -0.67
PTPRE-207ENST00000471218 CYP46A1Q9Y6A2 500 aa10.87□□□□□ -0.67
PTPRE-207ENST00000471218 FAM205AQ6ZU69 1335 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 GPAA1O43292 621 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 PCP11498 1178 aaKnown RBP10.86□□□□□ -0.67
PTPRE-207ENST00000471218 GYG1P46976 350 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 NEK4P51957 841 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 PRAMEF18Q5VWM3 479 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 MOB2Q70IA6 237 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 NBPF11Q86T75 865 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 IFNL1Q8IU54 200 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 ZSCAN31Q96LW9 406 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-207ENST00000471218 TTC14Q96N46 770 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 NACAP1Q9BZK3 213 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 CD209Q9NNX6 404 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 SH2B1Q9NRF2 756 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-207ENST00000471218 LRP2BPQ9P2M1 347 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 PALD1Q9ULE6 856 aa10.86□□□□□ -0.67
PTPRE-207ENST00000471218 ZNF532Q9HCE3 1301 aa10.85□□□□□ -0.67
PTPRE-207ENST00000471218 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms