RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MROH1Q8NDA8 1641 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 ADGRF5Q8IZF2 1346 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 BHMG1C9JSJ3 638 aaPredicted RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 CBFA2T2O43439 604 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 PPP1R12BO60237 982 aaPredicted RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 ZNF202O95125 648 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 IRAK1P51617 712 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 PRSS12P56730 875 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 GUCY1B3Q02153 619 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 FAM160A1Q05DH4 1040 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 TBC1D8BQ0IIM8 1120 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 ST3GAL1Q11201 340 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 MTX1Q13505 466 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 RBBP5Q15291 538 aaKnown RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 TOGARAM2Q6ZUX3 1019 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 SAMD7Q7Z3H4 446 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 RUFY2Q8WXA3 655 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 SPDL1Q96EA4 605 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 SH3GL3Q99963 347 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 CAPS2Q9BXY5 557 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 LSG1Q9H089 658 aaKnown RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 KLC4Q9NSK0 619 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 ETAA1Q9NY74 926 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 STRCP1A6NGW2 1772 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 SAMD9LQ8IVG5 1584 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 MYOM2P54296 1465 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 PNMA6EA0A0J9YXQ4 647 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 EME2A4GXA9 379 aaPredicted RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 SURF6O75683 361 aaKnown RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 IPO7O95373 1038 aaKnown RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 SLC3A2P08195 630 aaKnown RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 PTH1RQ03431 593 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 STIM1Q13586 685 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 NBPF10Q6P3W6 841 aaKnown RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 CCDC148Q8NFR7 591 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 DPF2Q92785 391 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 LRCH3Q96II8 777 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 HINFPQ9BQA5 517 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.81□□□□□ -1.64
VPS50-210ENST00000471188 CDC23Q9UJX2 597 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 HPS5Q9UPZ3 1129 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 IQGAP1P46940 1657 aa4.81□□□□□ -1.64
VPS50-210ENST00000471188 TMEM232C9JQI7 657 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ZMYND10O75800 440 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 MYBL2P10244 700 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 PSMA5P28066 241 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 GGCXP38435 758 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 PPARDQ03181 441 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 SNX1Q13596 522 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 C11orf91Q3C1V1 193 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 PREPLQ4J6C6 727 aaPredicted RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 B4GALNT4Q76KP1 1039 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 PARD3BQ8TEW8 1205 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ZNF483Q8TF39 744 aaPredicted RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 CPLX3Q8WVH0 158 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 CCDC114Q96M63 670 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 PAIP2Q9BPZ3 127 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 FANCLQ9NW38 375 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 SHANK2Q9UPX8 1470 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 CTAGE9A4FU28 777 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ATP2C2O75185 946 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 CCDC175P0C221 793 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ARHGAP25P42331 645 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 FAM98CQ17RN3 349 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 CCDC40Q4G0X9 1142 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 MRPS27Q92552 414 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 NECTIN2Q92692 538 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 RSRC1Q96IZ7 334 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 USP28Q96RU2 1077 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 RUFY1Q96T51 708 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 POLD4Q9HCU8 107 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 A1CFQ9NQ94 594 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 MIS18AQ9NYP9 233 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 CDHR2Q9BYE9 1310 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ADGRB2O60241 1585 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 YTHDC2Q9H6S0 1430 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 SYF2O95926 243 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 USP5P45974 858 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ADCY2Q08462 1091 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 STK38Q15208 465 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ANKRD1Q15327 319 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 SNCBQ16143 134 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 MICALCLQ6ZW33 695 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 KIAA1328Q86T90 577 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 FCHSD1Q86WN1 690 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.8□□□□□ -1.64
VPS50-210ENST00000471188 GSPT2Q8IYD1 628 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 MICAL1Q8TDZ2 1067 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 NLRP7Q8WX94 980 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 ITFG2Q969R8 447 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 KIFC2Q96AC6 838 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 SAAL1Q96ER3 474 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 STK31Q9BXU1 1019 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 RAB21Q9UL25 225 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 MYO6Q9UM54 1294 aa4.8□□□□□ -1.64
VPS50-210ENST00000471188 RBM8AQ9Y5S9 174 aaKnown RBP4.8□□□□□ -1.64
VPS50-210ENST00000471188 KNDC1Q76NI1 1749 aa4.79□□□□□ -1.64
VPS50-210ENST00000471188 GOLGA6BA6NDN3 693 aa4.79□□□□□ -1.64
VPS50-210ENST00000471188 MEFVO15553 781 aaPredicted RBP4.79□□□□□ -1.64
VPS50-210ENST00000471188 KIF4AO95239 1232 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms