RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 LMOD1P29536 600 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 SERPINB6P35237 376 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 RFC4P35249 363 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 KIF22Q14807 665 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 IQSEC3Q9UPP2 1182 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 GOLGA6CA6NDK9 693 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 GOLGA6DP0CG33 693 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 U2AF2P26368 475 aaKnown RBP eCLIP7.67□□□□□ -1.181e-6■■■□□ 19.1
BRCA1-210ENST00000471181 FBXW4P57775 412 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 PPP2R3AQ06190 1150 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 ASIC2Q16515 512 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 MAP3K21Q5TCX8 1036 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 GPIHBP1Q8IV16 184 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 MRPS27Q92552 414 aaKnown RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 CEP19Q96LK0 163 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 EIF2AQ9BY44 585 aaKnown RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 Q9H521 79 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 GPHNQ9NQX3 736 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 OLA1Q9NTK5 396 aaKnown RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 GOLGA6AQ9NYA3 693 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 GNGT2O14610 69 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 KRT19P08727 400 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 KRT2P35908 639 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 MICAL1Q8TDZ2 1067 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 JARID2Q92833 1246 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 ATP6V0A1Q93050 837 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 KRT82Q9NSB4 513 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 PPP1R9AQ9ULJ8 1098 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 STRN3Q13033 797 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 F6X3S4 739 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 S100BP04271 92 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-210ENST00000471181 RAD51AP2Q09MP3 1159 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 BRD3Q15059 726 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 MMEL1Q495T6 779 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 LDHAL6AQ6ZMR3 332 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 KLHL7Q8IXQ5 586 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 KCNG4Q8TDN1 519 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 ZSCAN16Q9H4T2 348 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-210ENST00000471181 TDRD9Q8NDG6 1382 aaKnown RBP7.66□□□□□ -1.18
BRCA1-210ENST00000471181 WBP4O75554 376 aaKnown RBP7.66□□□□□ -1.18
BRCA1-210ENST00000471181 NPR1P16066 1061 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 IRX4P78413 519 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 TBCCQ15814 346 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 OGFOD1Q8N543 542 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 MED10Q9BTT4 135 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 PEX19P40855 299 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 MAEAQ7L5Y9 396 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 NUDCD3Q8IVD9 361 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 ABCF3Q9NUQ8 709 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 TEKT2Q9UIF3 430 aa7.66□□□□□ -1.18
BRCA1-210ENST00000471181 TTC4O95801 387 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 TMED1Q13445 227 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 SLC12A1Q13621 1099 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 PHLDB3Q6NSJ2 640 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 DCUN1D2Q6PH85 259 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 CTAGE3PQ8IX95 158 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 NOX5Q96PH1 765 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 PLEKHA4Q9H4M7 779 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 FAN1Q9Y2M0 1017 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 IFRD2Q12894 506 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-210ENST00000471181 TSHZ3Q63HK5 1081 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 BRF1Q92994 677 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 CCDC94Q9BW85 323 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-210ENST00000471181 TRIM55Q9BYV6 548 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 RPL13P26373 211 aaKnown RBP7.65□□□□□ -1.18
BRCA1-210ENST00000471181 CNGA4Q8IV77 575 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 SPDYE1Q8NFV5 336 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-210ENST00000471181 ESR2Q92731 530 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 NR1H4Q96RI1 486 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-210ENST00000471181 NOC4LQ9BVI4 516 aaKnown RBP7.65□□□□□ -1.18
BRCA1-210ENST00000471181 CARD10Q9BWT7 1032 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 HELLSQ9NRZ9 838 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 RIPOR2Q9Y4F9 1068 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 ORC6Q9Y5N6 252 aa7.65□□□□□ -1.18
BRCA1-210ENST00000471181 GOLGA6BA6NDN3 693 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 VGLL3A8MV65 326 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 ATP5J2-PTCD1G3V325 749 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 GSTA4O15217 222 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 NVLO15381 856 aaKnown RBP7.65□□□□□ -1.19
BRCA1-210ENST00000471181 ZSCAN22P10073 491 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-210ENST00000471181 TROVE2P10155 538 aaKnown RBP eCLIP7.65□□□□□ -1.19
BRCA1-210ENST00000471181 RSBN1LQ6PCB5 846 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-210ENST00000471181 CABS1Q96KC9 395 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 THUMPD2Q9BTF0 503 aaKnown RBP7.65□□□□□ -1.19
BRCA1-210ENST00000471181 ZNF408Q9H9D4 720 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 LONRF3Q496Y0 759 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 PPP1R42Q7Z4L9 355 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 HELBQ8NG08 1087 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-210ENST00000471181 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-210ENST00000471181 PLCB1Q9NQ66 1216 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 IFNKQ9P0W0 207 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 MYO1AQ9UBC5 1043 aa7.65□□□□□ -1.19
BRCA1-210ENST00000471181 TRAF5O00463 557 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 CAVIN2O95810 425 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 EVCP57679 992 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 NBPF5PQ86XG9 351 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-210ENST00000471181 PALM2Q8IXS6 379 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 ZSCAN32Q9NX65 697 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 CTTNBP2NLQ9P2B4 639 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 DDX39AO00148 427 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms