RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 RHPN1Q8TCX5 695 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 PSMD1Q99460 953 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 METTL22Q9BUU2 404 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-216ENST00000470998 USP26Q9BXU7 913 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 BCORQ6W2J9 1755 aa6.84□□□□□ -1.31
HDAC8-216ENST00000470998 NEURL1BA8MQ27 555 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 GOLGA6L22H0YM25 854 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 PDIA4P13667 645 aaKnown RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 HOXA10P31260 410 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 DDIT3P35638 169 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 NUCB2P80303 420 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 OS9Q13438 667 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 RABL6Q3YEC7 729 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 SLC10A5Q5PT55 438 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 PDXDC2PQ6P474 469 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 CLEC17AQ6ZS10 378 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 TTLL7Q6ZT98 887 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 LRP10Q7Z4F1 713 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 ZNF34Q8IZ26 560 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 DNAJC5GQ8N7S2 189 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 PLBD2Q8NHP8 589 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 RPGRQ92834 1020 aaKnown RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 KLRG1Q96E93 195 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 RBM17Q96I25 401 aaKnown RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 NLRP3Q96P20 1036 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 CRAMP1Q96RY5 1269 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 KIF2CQ99661 725 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 ESYT1Q9BSJ8 1104 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 TMX4Q9H1E5 349 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 VPS33BQ9H267 617 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 ECHDC1Q9NTX5 307 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 TOR4AQ9NXH8 423 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 TLL2Q9Y6L7 1015 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 NDUFB9Q9Y6M9 179 aa6.83□□□□□ -1.32
HDAC8-216ENST00000470998 TNRC6CQ9HCJ0 1690 aaKnown RBP6.83□□□□□ -1.32
HDAC8-216ENST00000470998 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 UBN2Q6ZU65 1347 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 FAM177BA6PVY3 158 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 POTECB2RU33 542 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 NTSR2O95665 410 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 NBPF7P0C2Y1 421 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-216ENST00000470998 CHMLP26374 656 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 DEKP35659 375 aaKnown RBP6.82□□□□□ -1.32
HDAC8-216ENST00000470998 G3BP1Q13283 466 aaKnown RBP eCLIP6.82□□□□□ -1.32
HDAC8-216ENST00000470998 GCKRQ14397 625 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 SKOR2Q2VWA4 1001 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-216ENST00000470998 SUSD4Q5VX71 490 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 JMYQ8N9B5 988 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 EPS8L1Q8TE68 723 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 EVI5LQ96CN4 794 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 SLC10A4Q96EP9 437 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 UTP14AQ9BVJ6 771 aaKnown RBP6.82□□□□□ -1.32
HDAC8-216ENST00000470998 SLKQ9H2G2 1235 aaPredicted RBP6.82□□□□□ -1.32
HDAC8-216ENST00000470998 COPRSQ9NQ92 184 aa6.82□□□□□ -1.32
HDAC8-216ENST00000470998 ANKRD31Q8N7Z5 1873 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 FZD9O00144 591 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
HDAC8-216ENST00000470998 DDNO94850 711 aaPredicted RBP6.81□□□□□ -1.32
HDAC8-216ENST00000470998 IFIT2P09913 472 aaKnown RBP6.81□□□□□ -1.32
HDAC8-216ENST00000470998 GPTP24298 496 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 IARSP41252 1262 aaKnown RBP6.81□□□□□ -1.32
HDAC8-216ENST00000470998 TCIRG1Q13488 830 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 RAB3GAP1Q15042 981 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 COPS6Q7L5N1 327 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 SH3BP5LQ7L8J4 393 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 LDHDQ86WU2 507 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 SYNE4Q8N205 404 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 SUPT20HQ8NEM7 779 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 PI4K2BQ8TCG2 481 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 OTUD7AQ8TE49 926 aaPredicted RBP6.81□□□□□ -1.32
HDAC8-216ENST00000470998 XAGE3Q8WTP9 111 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 JDP2Q8WYK2 163 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 INTS4Q96HW7 963 aaKnown RBP6.81□□□□□ -1.32
HDAC8-216ENST00000470998 GPR108Q9NPR9 543 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 SNRKQ9NRH2 765 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 GPSM3Q9Y4H4 160 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 WDR90Q96KV7 1748 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 SBF1O95248 1867 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 ABCC12Q96J65 1359 aa6.81□□□□□ -1.32
HDAC8-216ENST00000470998 J3QL48 77 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 SGSM2O43147 1006 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 BBOX1O75936 387 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 IGKV5-2P06315 115 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 HSP90B1P14625 803 aaKnown RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 MCM4P33991 863 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 EIF6P56537 245 aaKnown RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 TRIM28Q13263 835 aaKnown RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 PROSER3Q2NL68 480 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 L1TD1Q5T7N2 865 aaKnown RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 TRAF7Q6Q0C0 670 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 KIAA1211Q6ZU35 1233 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 VASH1Q7L8A9 365 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 TMC4Q7Z404 712 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 PNMA8AQ86V59 439 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-216ENST00000470998 GPC2Q8N158 579 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 MTMR14Q8NCE2 650 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 CCDC191Q8NCU4 936 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 SNED1Q8TER0 1413 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 TRIM34Q9BYJ4 488 aa6.8□□□□□ -1.32
HDAC8-216ENST00000470998 TAF1DQ9H5J8 278 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms