RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 CLEC10AQ8IUN9 316 aa8.48□□□□□ -1.05
GPNMB-208ENST00000470994 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
GPNMB-208ENST00000470994 ARXQ96QS3 562 aa8.48□□□□□ -1.05
GPNMB-208ENST00000470994 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
GPNMB-208ENST00000470994 CCDC9Q9Y3X0 531 aaKnown RBP8.48□□□□□ -1.05
GPNMB-208ENST00000470994 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
GPNMB-208ENST00000470994 RGS12O14924 1447 aa8.47□□□□□ -1.05
GPNMB-208ENST00000470994 BRD2P25440 801 aaKnown RBP8.47□□□□□ -1.05
GPNMB-208ENST00000470994 LMOD1P29536 600 aaPredicted RBP8.47□□□□□ -1.05
GPNMB-208ENST00000470994 COX20Q5RI15 118 aa8.47□□□□□ -1.05
GPNMB-208ENST00000470994 PRAM1Q96QH2 718 aa8.47□□□□□ -1.05
GPNMB-208ENST00000470994 C14orf93Q9H972 538 aaKnown RBP8.47□□□□□ -1.05
GPNMB-208ENST00000470994 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
GPNMB-208ENST00000470994 ABCC11Q96J66 1382 aa8.47□□□□□ -1.05
GPNMB-208ENST00000470994 XRN1Q8IZH2 1706 aaKnown RBP8.46□□□□□ -1.05
GPNMB-208ENST00000470994 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
GPNMB-208ENST00000470994 HMX2A2RU54 273 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 FSCN2O14926 492 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 SCNN1AP37088 669 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 FZD5Q13467 585 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 TTC39BQ5VTQ0 682 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-208ENST00000470994 TXNDC11Q6PKC3 985 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 UNC5CLQ8IV45 518 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 GIMAP7Q8NHV1 300 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 PMFBP1Q8TBY8 1022 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 FAM83CQ9BQN1 747 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 KCNF1Q9H3M0 494 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 DHX57Q6P158 1386 aaKnown RBP8.46□□□□□ -1.06
GPNMB-208ENST00000470994 SETD1AO15047 1707 aaKnown RBP8.46□□□□□ -1.06
GPNMB-208ENST00000470994 SPHKAPQ2M3C7 1700 aa8.46□□□□□ -1.06
GPNMB-208ENST00000470994 ATP11AP98196 1134 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-208ENST00000470994 ANKRD34AQ69YU3 496 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 FAM20CQ8IXL6 584 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 HIRIP3Q9BW71 556 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-208ENST00000470994 CARD10Q9BWT7 1032 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 TRAK1Q9UPV9 953 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 HIF3AQ9Y2N7 669 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 SPATA31A3Q5VYP0 1347 aa8.45□□□□□ -1.06
GPNMB-208ENST00000470994 SHPRHQ149N8 1683 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 PRR19A6NJB7 356 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 PTPRAP18433 802 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 CDC25BP30305 580 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 SF3B2Q13435 895 aaKnown RBP8.44□□□□□ -1.06
GPNMB-208ENST00000470994 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-208ENST00000470994 BEND4Q6ZU67 534 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 SHKBP1Q8TBC3 707 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 KCNK4Q9NYG8 393 aa8.44□□□□□ -1.06
GPNMB-208ENST00000470994 ACIN1Q9UKV3 1341 aaKnown RBP8.44□□□□□ -1.06
GPNMB-208ENST00000470994 YTHDC2Q9H6S0 1430 aaKnown RBP8.44□□□□□ -1.06
GPNMB-208ENST00000470994 ADAMTS4O75173 837 aa8.43□□□□□ -1.06
GPNMB-208ENST00000470994 CABP4P57796 275 aa8.43□□□□□ -1.06
GPNMB-208ENST00000470994 C16orf46Q6P387 395 aa8.43□□□□□ -1.06
GPNMB-208ENST00000470994 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
GPNMB-208ENST00000470994 RNF208Q9H0X6 261 aa8.43□□□□□ -1.06
GPNMB-208ENST00000470994 ANGEL1Q9UNK9 670 aaKnown RBP8.43□□□□□ -1.06
GPNMB-208ENST00000470994 SPATA31E1Q6ZUB1 1445 aa8.43□□□□□ -1.06
GPNMB-208ENST00000470994 A6NJR5 290 aa8.42□□□□□ -1.06
GPNMB-208ENST00000470994 BMP3P12645 472 aa8.42□□□□□ -1.06
GPNMB-208ENST00000470994 FKBP5Q13451 457 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-208ENST00000470994 FDX2Q6P4F2 183 aa8.42□□□□□ -1.06
GPNMB-208ENST00000470994 NGDNQ8NEJ9 315 aaKnown RBP8.42□□□□□ -1.06
GPNMB-208ENST00000470994 WNT8BQ93098 351 aa8.42□□□□□ -1.06
GPNMB-208ENST00000470994 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
GPNMB-208ENST00000470994 ATRNO75882 1429 aa8.42□□□□□ -1.06
GPNMB-208ENST00000470994 ARID1BQ8NFD5 2236 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-208ENST00000470994 BCL9LQ86UU0 1499 aa8.41□□□□□ -1.06
GPNMB-208ENST00000470994 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
GPNMB-208ENST00000470994 SWI5Q1ZZU3 235 aa8.41□□□□□ -1.06
GPNMB-208ENST00000470994 PBX4Q9BYU1 374 aa8.41□□□□□ -1.06
GPNMB-208ENST00000470994 RASSF4Q9H2L5 321 aa8.41□□□□□ -1.06
GPNMB-208ENST00000470994 ADGRE2Q9UHX3 823 aa8.41□□□□□ -1.06
GPNMB-208ENST00000470994 MYOM2P54296 1465 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 PRAG1Q86YV5 1406 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 WDR64B1ANS9 1081 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 GAS2O43903 313 aaKnown RBP8.4□□□□□ -1.06
GPNMB-208ENST00000470994 KIF4AO95239 1232 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 RFX1P22670 979 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 VPS72Q15906 364 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 COL13A1Q5TAT6 717 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-208ENST00000470994 DEFB132Q7Z7B7 95 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 NCAPG2Q86XI2 1143 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 UBASH3BQ8TF42 649 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-208ENST00000470994 COL26A1Q96A83 441 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 ATG3Q9NT62 314 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-208ENST00000470994 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
GPNMB-208ENST00000470994 KIF1BO60333 1816 aa8.4□□□□□ -1.07
GPNMB-208ENST00000470994 NHSL1Q5SYE7 1610 aa8.4□□□□□ -1.07
GPNMB-208ENST00000470994 PXDNQ92626 1479 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 TECPR2O15040 1411 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 GPRASP1Q5JY77 1395 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 RAB3GAP2Q9H2M9 1393 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 H3BRJ5 948 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 EPHA1P21709 976 aa8.39□□□□□ -1.07
GPNMB-208ENST00000470994 CPSF6Q16630 551 aaKnown RBP eCLIP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms