RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SBK1Q52WX2 424 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 AKNAD1Q5T1N1 836 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 CDC42EP5Q6NZY7 148 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 CTR9Q6PD62 1173 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 ZSCAN29Q8IWY8 852 aaPredicted RBP11.55□□□□□ -0.56
CCM2-204ENST00000470837 SNX21Q969T3 373 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 IL17RAQ96F46 866 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 GMLQ99445 158 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 KIF2CQ99661 725 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 MYOZ2Q9NPC6 264 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 ARFGEF1Q9Y6D6 1849 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 RPS6KB1P23443 525 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 MCM5P33992 734 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 NT5C2P49902 561 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 SART3Q15020 963 aaKnown RBP11.54□□□□□ -0.56
CCM2-204ENST00000470837 ADCK5Q3MIX3 580 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
CCM2-204ENST00000470837 DHX32Q7L7V1 743 aaKnown RBP11.54□□□□□ -0.56
CCM2-204ENST00000470837 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 STAG1Q8WVM7 1258 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 ESR2Q92731 530 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 TDRD3Q9H7E2 651 aaKnown RBP11.54□□□□□ -0.56
CCM2-204ENST00000470837 MKNK2Q9HBH9 465 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 SAP30BPQ9UHR5 308 aaKnown RBP11.54□□□□□ -0.56
CCM2-204ENST00000470837 CNOT7Q9UIV1 285 aaKnown RBP11.54□□□□□ -0.56
CCM2-204ENST00000470837 ANAPC4Q9UJX5 808 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 MYH7P12883 1935 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 FLT1P17948 1338 aa11.54□□□□□ -0.56
CCM2-204ENST00000470837 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 ERICH2A1L162 156 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 TNNI2P48788 182 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 ZNF280AP59817 542 aaPredicted RBP11.53□□□□□ -0.56
CCM2-204ENST00000470837 TNFAIP1Q13829 316 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
CCM2-204ENST00000470837 STK11IPQ8N1F8 1099 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 MTMR14Q8NCE2 650 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
CCM2-204ENST00000470837 VEZTQ9HBM0 779 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
CCM2-204ENST00000470837 CCDC88AQ3V6T2 1871 aa11.53□□□□□ -0.56
CCM2-204ENST00000470837 COL4A5P29400 1685 aa11.52□□□□□ -0.56
CCM2-204ENST00000470837 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
CCM2-204ENST00000470837 ENTPD3O75355 529 aa11.52□□□□□ -0.57
CCM2-204ENST00000470837 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
CCM2-204ENST00000470837 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
CCM2-204ENST00000470837 PRELPP51888 382 aa11.52□□□□□ -0.57
CCM2-204ENST00000470837 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
CCM2-204ENST00000470837 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.57
CCM2-204ENST00000470837 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
CCM2-204ENST00000470837 PRMT6Q96LA8 375 aaPredicted RBP11.52□□□□□ -0.57
CCM2-204ENST00000470837 UBAC1Q9BSL1 405 aa11.52□□□□□ -0.57
CCM2-204ENST00000470837 IDI2Q9BXS1 227 aa11.52□□□□□ -0.57
CCM2-204ENST00000470837 OSBPL5Q9H0X9 879 aaPredicted RBP11.52□□□□□ -0.57
CCM2-204ENST00000470837 ZNF70Q9UC06 446 aaPredicted RBP11.52□□□□□ -0.57
CCM2-204ENST00000470837 CLRN2A0PK11 232 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 B4E1Z4 1266 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 PRC1O43663 620 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 RANBP6O60518 1105 aaKnown RBP11.51□□□□□ -0.57
CCM2-204ENST00000470837 TCP10Q12799 353 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 KIF4BQ2VIQ3 1234 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
CCM2-204ENST00000470837 IQCA1Q86XH1 822 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
CCM2-204ENST00000470837 CHMP4CQ96CF2 233 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 ZSCAN31Q96LW9 406 aaPredicted RBP11.51□□□□□ -0.57
CCM2-204ENST00000470837 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 MKRN1Q9UHC7 482 aaKnown RBP11.51□□□□□ -0.57
CCM2-204ENST00000470837 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
CCM2-204ENST00000470837 LIMCH1Q9UPQ0 1083 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 TAF6LQ9Y6J9 622 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 WDR19Q8NEZ3 1342 aa11.51□□□□□ -0.57
CCM2-204ENST00000470837 CYP2D7A0A087X1C5 515 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 TSPY2A6NKD2 308 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 TCP10L2B9ZVM9 353 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 WNT10BO00744 389 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 KDM4AO75164 1064 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 CYP2D6P10635 497 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 CPA1P15085 419 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 CACNB3P54284 484 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 AK2P54819 239 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 TBC1D10BQ4KMP7 808 aaPredicted RBP11.5□□□□□ -0.57
CCM2-204ENST00000470837 CCDC178Q5BJE1 867 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 FKBP1CQ5VVH2 108 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 SYNE3Q6ZMZ3 975 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 Q6ZUG5 572 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 STOX1Q6ZVD7 989 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 TMEM87BQ96K49 555 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 GPRC5DQ9NZD1 345 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 PI4KBQ9UBF8 816 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 SWAP70Q9UH65 585 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 SERPINB13Q9UIV8 391 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms