RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 SLC52A2Q9HAB3 445 aa7.7□□□□□ -1.18
CHD6-206ENST00000470470 TFIP11Q9UBB9 837 aaKnown RBP7.7□□□□□ -1.18
CHD6-206ENST00000470470 ATXN7L1Q9ULK2 861 aaPredicted RBP7.7□□□□□ -1.18
CHD6-206ENST00000470470 DOLKQ9UPQ8 538 aa7.7□□□□□ -1.18
CHD6-206ENST00000470470 KDM6AO15550 1401 aaPredicted RBP7.7□□□□□ -1.18
CHD6-206ENST00000470470 SPATA31A3Q5VYP0 1347 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 LAMB4A4D0S4 1761 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 LZTS3O60299 673 aaPredicted RBP7.69□□□□□ -1.18
CHD6-206ENST00000470470 NBPF7P0C2Y1 421 aaPredicted RBP7.69□□□□□ -1.18
CHD6-206ENST00000470470 MCCP23508 829 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 ITGB7P26010 798 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 XPCQ01831 940 aaPredicted RBP7.69□□□□□ -1.18
CHD6-206ENST00000470470 LARP1Q6PKG0 1096 aaKnown RBP7.69□□□□□ -1.18
CHD6-206ENST00000470470 PLPP7Q8NBV4 271 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 GPAMQ9HCL2 828 aa7.69□□□□□ -1.18
CHD6-206ENST00000470470 ZBTB7CA1YPR0 619 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 USP17L5A8MUK1 530 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 PIK3CDO00329 1044 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 GNB5O14775 395 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 SRGAP3O43295 1099 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 CSB-PGBD3P0DP91 1061 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 HOXB4P17483 251 aaPredicted RBP7.68□□□□□ -1.18
CHD6-206ENST00000470470 RFX1P22670 979 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 GTF2E1P29083 439 aaPredicted RBP7.68□□□□□ -1.18
CHD6-206ENST00000470470 CUL4AQ13619 759 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 GRIN2CQ14957 1233 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 EML3Q32P44 896 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 ZNF790Q6PG37 636 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 LINC00114Q6XXX2 140 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 PGBD3Q8N328 593 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 INTS4Q96HW7 963 aaKnown RBP7.68□□□□□ -1.18
CHD6-206ENST00000470470 ZSCAN10Q96SZ4 725 aaPredicted RBP7.68□□□□□ -1.18
CHD6-206ENST00000470470 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 MAP3K2Q9Y2U5 619 aa7.68□□□□□ -1.18
CHD6-206ENST00000470470 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
CHD6-206ENST00000470470 UBR2Q8IWV8 1755 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 USP17L3A6NCW0 530 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 USP17L4A6NCW7 530 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 GRM8O00222 908 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 GLRX3O76003 335 aaKnown RBP7.67□□□□□ -1.18
CHD6-206ENST00000470470 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
CHD6-206ENST00000470470 IL2RAP01589 272 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 HSP90AA1P07900 732 aaKnown RBP7.67□□□□□ -1.18
CHD6-206ENST00000470470 BMP4P12644 408 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 HSPA4P34932 840 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 ZC3H6P61129 1189 aaKnown RBP7.67□□□□□ -1.18
CHD6-206ENST00000470470 CENPCQ03188 943 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 EFHC2Q5JST6 749 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 GNASQ5JWF2 1037 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 ZMYM1Q5SVZ6 1142 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 USP17L2Q6R6M4 530 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 USP17L1Q7RTZ2 530 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 LRP10Q7Z4F1 713 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 KRTAP9-9Q9BYP9 154 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 KRTAP9-4Q9BYQ2 154 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 C9orf78Q9NZ63 289 aaPredicted RBP7.67□□□□□ -1.18
CHD6-206ENST00000470470 NOP53Q9NZM5 478 aaKnown RBP7.67□□□□□ -1.18
CHD6-206ENST00000470470 HRH3Q9Y5N1 445 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 MEGF6O75095 1541 aa7.67□□□□□ -1.18
CHD6-206ENST00000470470 AFDNP55196 1824 aaKnown RBP7.66□□□□□ -1.18
CHD6-206ENST00000470470 SGSM2O43147 1006 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 BAG4O95429 457 aaKnown RBP7.66□□□□□ -1.18
CHD6-206ENST00000470470 SNRPA1P09661 255 aaKnown RBP7.66□□□□□ -1.18
CHD6-206ENST00000470470 AMPD1P23109 780 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 PROSER3Q2NL68 480 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 TICAM2Q86XR7 235 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 CNTROBQ8N137 903 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 CLASRPQ8N2M8 674 aaKnown RBP7.66□□□□□ -1.18
CHD6-206ENST00000470470 KCNB2Q92953 911 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 RILPL2Q969X0 211 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 PBXIP1Q96AQ6 731 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 KAZALD1Q96I82 304 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 METTL22Q9BUU2 404 aaPredicted RBP7.66□□□□□ -1.18
CHD6-206ENST00000470470 ECHDC1Q9NTX5 307 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 NLRP2Q9NX02 1062 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 STRCQ7RTU9 1775 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 ARFGEF2Q9Y6D5 1785 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 GLI3P10071 1580 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 PAPPAQ13219 1627 aa7.66□□□□□ -1.18
CHD6-206ENST00000470470 NEURL1BA8MQ27 555 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 ERVV-2B6SEH9 535 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 GOLGA6L22H0YM25 854 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 HIP1O00291 1037 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 CYP27B1O15528 508 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 ANXA1P04083 346 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 FGFR3P22607 806 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 NEXNQ0ZGT2 675 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 TRIM50Q86XT4 487 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 UNC5CLQ8IV45 518 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 PHTF2Q8N3S3 785 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 RUFY2Q8WXA3 655 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 GPATCH3Q96I76 525 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 FMNL2Q96PY5 1086 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 FHDC1Q9C0D6 1143 aaPredicted RBP7.65□□□□□ -1.18
CHD6-206ENST00000470470 VRTNQ9H8Y1 702 aa7.65□□□□□ -1.18
CHD6-206ENST00000470470 IL1RAPL2Q9NP60 686 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms