RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 FOXP4Q8IVH2 680 aaPredicted RBP13.2□□□□□ -0.3
RFTN1-208ENST00000470458 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 PICK1Q9NRD5 415 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 MAST2Q6P0Q8 1798 aa13.2□□□□□ -0.3
RFTN1-208ENST00000470458 SPDYE5A6NIY4 337 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
RFTN1-208ENST00000470458 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 CYP7A1P22680 504 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 CACNB3P54284 484 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 SNAPC2Q13487 334 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
RFTN1-208ENST00000470458 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
RFTN1-208ENST00000470458 OPTNQ96CV9 577 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 DDRGK1Q96HY6 314 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 RWDD1Q9H446 243 aaPredicted RBP13.19□□□□□ -0.3
RFTN1-208ENST00000470458 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.19□□□□□ -0.3
RFTN1-208ENST00000470458 LAMB1P07942 1786 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
RFTN1-208ENST00000470458 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
RFTN1-208ENST00000470458 RHBDL3P58872 404 aa13.18□□□□□ -0.3
RFTN1-208ENST00000470458 PPIL2Q13356 520 aa13.18□□□□□ -0.3
RFTN1-208ENST00000470458 VGLL4Q14135 290 aa13.18□□□□□ -0.3
RFTN1-208ENST00000470458 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
RFTN1-208ENST00000470458 TICAM2Q86XR7 235 aa13.18□□□□□ -0.3
RFTN1-208ENST00000470458 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
RFTN1-208ENST00000470458 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
RFTN1-208ENST00000470458 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
RFTN1-208ENST00000470458 DOCK2Q92608 1830 aa13.18□□□□□ -0.3
RFTN1-208ENST00000470458 AOX1Q06278 1338 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 SSC5DA1L4H1 1573 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 CXCL11O14625 94 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 NFIAQ12857 509 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 PICALMQ13492 652 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 HDAC1Q13547 482 aaPredicted RBP13.17□□□□□ -0.3
RFTN1-208ENST00000470458 SLC9C2Q5TAH2 1124 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 PI16Q6UXB8 463 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 MIGA2Q7L4E1 593 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
RFTN1-208ENST00000470458 TTC6Q86TZ1 520 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 MAGEB6Q8N7X4 407 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 HAUS7Q99871 368 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 PAG1Q9NWQ8 432 aa13.17□□□□□ -0.3
RFTN1-208ENST00000470458 AATFQ9NY61 560 aaKnown RBP eCLIP13.17□□□□□ -0.3
RFTN1-208ENST00000470458 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
RFTN1-208ENST00000470458 USP5P45974 858 aa13.16□□□□□ -0.3
RFTN1-208ENST00000470458 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
RFTN1-208ENST00000470458 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
RFTN1-208ENST00000470458 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
RFTN1-208ENST00000470458 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
RFTN1-208ENST00000470458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
RFTN1-208ENST00000470458 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
RFTN1-208ENST00000470458 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
RFTN1-208ENST00000470458 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
RFTN1-208ENST00000470458 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
RFTN1-208ENST00000470458 CASP8AP2Q9UKL3 1982 aa13.15□□□□□ -0.3
RFTN1-208ENST00000470458 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
RFTN1-208ENST00000470458 UBE3CQ15386 1083 aa13.15□□□□□ -0.3
RFTN1-208ENST00000470458 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
RFTN1-208ENST00000470458 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
RFTN1-208ENST00000470458 DNAJC2Q99543 621 aaKnown RBP13.15□□□□□ -0.3
RFTN1-208ENST00000470458 RFX7Q2KHR2 1363 aa13.15□□□□□ -0.3
RFTN1-208ENST00000470458 PCNTO95613 3336 aa13.15□□□□□ -0.31
RFTN1-208ENST00000470458 CCL15-CCL14A0A0B4J2E2 113 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 GOLIM4O00461 696 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
RFTN1-208ENST00000470458 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
RFTN1-208ENST00000470458 CCL15Q16663 113 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
RFTN1-208ENST00000470458 TGFBRAP1Q8WUH2 860 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
RFTN1-208ENST00000470458 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 ZIC5Q96T25 663 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
RFTN1-208ENST00000470458 FOCADQ5VW36 1801 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 MYO5AQ9Y4I1 1855 aaKnown RBP13.13□□□□□ -0.31
RFTN1-208ENST00000470458 GPR25O00155 361 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 FKTNO75072 461 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 GNRH1P01148 92 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 ASNSP08243 561 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 PDE6AP16499 860 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
RFTN1-208ENST00000470458 KIF22Q14807 665 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 ZNF384Q8TF68 577 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 EHD4Q9H223 541 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 ATP8A2Q9NTI2 1148 aa13.13□□□□□ -0.31
RFTN1-208ENST00000470458 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.13□□□□□ -0.31
RFTN1-208ENST00000470458 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms