RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 PCOLCE2Q9UKZ9 415 aa7.26□□□□□ -1.25
ITGA6-209ENST00000470259 PCDHGC5Q9Y5F6 944 aa7.26□□□□□ -1.25
ITGA6-209ENST00000470259 ENC1O14682 589 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 PAGE1O75459 146 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 USP17L7P0C7H9 530 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 FAM87AP0C7U9 286 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 BMP6P22004 513 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 LRRC14Q15048 493 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 MPRIPQ6WCQ1 1025 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 VSIG10LQ86VR7 867 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.25□□□□□ -1.25
ITGA6-209ENST00000470259 TP53INP2Q8IXH6 220 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 FAM8A1Q9UBU6 413 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 ZC3H7BQ9UGR2 993 aaKnown RBP7.25□□□□□ -1.25
ITGA6-209ENST00000470259 TTF2Q9UNY4 1162 aaKnown RBP7.25□□□□□ -1.25
ITGA6-209ENST00000470259 CSADQ9Y600 493 aa7.25□□□□□ -1.25
ITGA6-209ENST00000470259 ZNF252P-AS1Q0IIN9 211 aa7.24□□□□□ -1.25
ITGA6-209ENST00000470259 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
ITGA6-209ENST00000470259 LLGL2Q6P1M3 1020 aa7.24□□□□□ -1.25
ITGA6-209ENST00000470259 ARHGAP27Q6ZUM4 889 aa7.24□□□□□ -1.25
ITGA6-209ENST00000470259 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
ITGA6-209ENST00000470259 DCDC2CA8MYV0 355 aa7.23□□□□□ -1.25
ITGA6-209ENST00000470259 ERVK-24P63145 666 aa7.23□□□□□ -1.25
ITGA6-209ENST00000470259 RNF214Q8ND24 703 aa7.23□□□□□ -1.25
ITGA6-209ENST00000470259 FLCNQ8NFG4 579 aa7.23□□□□□ -1.25
ITGA6-209ENST00000470259 ISL2Q96A47 359 aa7.23□□□□□ -1.25
ITGA6-209ENST00000470259 FBXL18Q96ME1 805 aa7.23□□□□□ -1.25
ITGA6-209ENST00000470259 FRMD6Q96NE9 622 aa7.23□□□□□ -1.25
ITGA6-209ENST00000470259 COL17A1Q9UMD9 1497 aaPredicted RBP7.23□□□□□ -1.25
ITGA6-209ENST00000470259 TRIM37O94972 964 aa7.22□□□□□ -1.25
ITGA6-209ENST00000470259 NEFMP07197 916 aa7.22□□□□□ -1.25
ITGA6-209ENST00000470259 CELA3AP09093 270 aa7.22□□□□□ -1.25
ITGA6-209ENST00000470259 TAL1P17542 331 aaPredicted RBP7.22□□□□□ -1.25
ITGA6-209ENST00000470259 EIF4BP23588 611 aaKnown RBP7.22□□□□□ -1.25
ITGA6-209ENST00000470259 PPM1JQ5JR12 505 aa7.22□□□□□ -1.25
ITGA6-209ENST00000470259 SND1Q7KZF4 910 aaKnown RBP eCLIP7.22□□□□□ -1.253e-7■■■□□ 15.2
ITGA6-209ENST00000470259 C12orf40Q86WS4 652 aa7.22□□□□□ -1.25
ITGA6-209ENST00000470259 PCDHA4Q9UN74 947 aa7.22□□□□□ -1.25
ITGA6-209ENST00000470259 ANKRD33BA6NCL7 494 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 PAX4O43316 350 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 PRPF40AO75400 957 aaKnown RBP7.21□□□□□ -1.26
ITGA6-209ENST00000470259 PRNPP04156 253 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 GNA15P30679 374 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 FGD1P98174 961 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 EAPPQ56P03 285 aaPredicted RBP7.21□□□□□ -1.26
ITGA6-209ENST00000470259 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 ABI1Q8IZP0 508 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 ELMO3Q96BJ8 720 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 CYP8B1Q9UNU6 501 aa7.21□□□□□ -1.26
ITGA6-209ENST00000470259 LEFTY1O75610 366 aa7.2□□□□□ -1.26
ITGA6-209ENST00000470259 LMNB1P20700 586 aa7.2□□□□□ -1.26
ITGA6-209ENST00000470259 TOP6BLQ8N6T0 577 aa7.2□□□□□ -1.26
ITGA6-209ENST00000470259 FAM181AQ8N9Y4 354 aa7.2□□□□□ -1.26
ITGA6-209ENST00000470259 SLC5A6Q9Y289 635 aa7.2□□□□□ -1.26
ITGA6-209ENST00000470259 SV2BQ7L1I2 683 aa7.19□□□□□ -1.26
ITGA6-209ENST00000470259 ANKRD24Q8TF21 1146 aa7.19□□□□□ -1.26
ITGA6-209ENST00000470259 DUSP9Q99956 384 aaKnown RBP7.19□□□□□ -1.26
ITGA6-209ENST00000470259 DUSP23Q9BVJ7 150 aa7.19□□□□□ -1.26
ITGA6-209ENST00000470259 RASIP1Q5U651 963 aa7.18□□□□□ -1.26
ITGA6-209ENST00000470259 STK11IPQ8N1F8 1099 aa7.18□□□□□ -1.26
ITGA6-209ENST00000470259 AGBL5Q8NDL9 886 aa7.18□□□□□ -1.26
ITGA6-209ENST00000470259 NETO1Q8TDF5 533 aa7.18□□□□□ -1.26
ITGA6-209ENST00000470259 CACNA2D2Q9NY47 1150 aa7.18□□□□□ -1.26
ITGA6-209ENST00000470259 ADGRE2Q9UHX3 823 aa7.18□□□□□ -1.26
ITGA6-209ENST00000470259 AK5Q9Y6K8 562 aa7.18□□□□□ -1.26
ITGA6-209ENST00000470259 PRAMEF27A3QJZ7 478 aa7.17□□□□□ -1.26
ITGA6-209ENST00000470259 FANCGO15287 622 aa7.17□□□□□ -1.26
ITGA6-209ENST00000470259 COL19A1Q14993 1142 aa7.17□□□□□ -1.26
ITGA6-209ENST00000470259 CCDC85BQ15834 202 aaPredicted RBP7.17□□□□□ -1.26
ITGA6-209ENST00000470259 TTBK2Q6IQ55 1244 aa7.17□□□□□ -1.26
ITGA6-209ENST00000470259 PLD6Q8N2A8 252 aaKnown RBP7.17□□□□□ -1.26
ITGA6-209ENST00000470259 RNF19AQ9NV58 838 aa7.17□□□□□ -1.26
ITGA6-209ENST00000470259 BNIP3Q12983 259 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 MAP3K11Q16584 847 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 ZBTB37Q5TC79 503 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 SCARA3Q6AZY7 606 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 HDXQ7Z353 690 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 KCT2Q8NC54 265 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 ZNF507Q8TCN5 953 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 BCL7CQ8WUZ0 217 aaPredicted RBP7.16□□□□□ -1.26
ITGA6-209ENST00000470259 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
ITGA6-209ENST00000470259 PAK6Q9NQU5 681 aaPredicted RBP7.16□□□□□ -1.26
ITGA6-209ENST00000470259 ITIH2P19823 946 aa7.15□□□□□ -1.26
ITGA6-209ENST00000470259 INPP5AQ14642 412 aa7.15□□□□□ -1.26
ITGA6-209ENST00000470259 PLCL1Q15111 1095 aa7.15□□□□□ -1.26
ITGA6-209ENST00000470259 ZNF574Q6ZN55 896 aaPredicted RBP7.15□□□□□ -1.26
ITGA6-209ENST00000470259 NFXL1Q6ZNB6 911 aa7.15□□□□□ -1.26
ITGA6-209ENST00000470259 PRDM10Q9NQV6 1147 aa7.15□□□□□ -1.26
ITGA6-209ENST00000470259 GTF2IRD1Q9UHL9 959 aa7.15□□□□□ -1.26
ITGA6-209ENST00000470259 ETF1P62495 437 aaKnown RBP7.14□□□□□ -1.27
ITGA6-209ENST00000470259 XPCQ01831 940 aaPredicted RBP7.14□□□□□ -1.27
ITGA6-209ENST00000470259 PTPN11Q06124 597 aaPredicted RBP7.14□□□□□ -1.27
ITGA6-209ENST00000470259 PSMD2Q13200 908 aa7.14□□□□□ -1.27
ITGA6-209ENST00000470259 IFI16Q16666 785 aaKnown RBP7.14□□□□□ -1.27
ITGA6-209ENST00000470259 LRFN4Q6PJG9 635 aa7.14□□□□□ -1.27
ITGA6-209ENST00000470259 SPRED2Q7Z698 418 aa7.14□□□□□ -1.27
ITGA6-209ENST00000470259 UBE3DQ7Z6J8 389 aa7.14□□□□□ -1.27
ITGA6-209ENST00000470259 PLPPR2Q96GM1 343 aa7.14□□□□□ -1.27
ITGA6-209ENST00000470259 PARP2Q9UGN5 583 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms