RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TMEM67Q5HYA8 995 aa21.32■■□□□ 1
SMC4-211ENST00000469858 CERS5Q8N5B7 392 aa21.32■■□□□ 1
SMC4-211ENST00000469858 IGDCC4Q8TDY8 1250 aa21.32■■□□□ 1
SMC4-211ENST00000469858 DDX11Q96FC9 970 aa21.32■■□□□ 1
SMC4-211ENST00000469858 LLPHQ9BRT6 129 aaKnown RBP21.32■■□□□ 1
SMC4-211ENST00000469858 MCM9Q9NXL9 1143 aa21.32■■□□□ 1
SMC4-211ENST00000469858 SNED1Q8TER0 1413 aa21.31■■□□□ 1
SMC4-211ENST00000469858 F8W031 263 aaPredicted RBP21.31■■□□□ 1
SMC4-211ENST00000469858 IFIT3O14879 490 aaKnown RBP21.31■■□□□ 1
SMC4-211ENST00000469858 PDCP20941 246 aa21.31■■□□□ 1
SMC4-211ENST00000469858 EVX2Q03828 476 aa21.31■■□□□ 1
SMC4-211ENST00000469858 CC2D2BQ6DHV5 1058 aa21.31■■□□□ 1
SMC4-211ENST00000469858 TTLL6Q8N841 843 aa21.31■■□□□ 1
SMC4-211ENST00000469858 NSUN7Q8NE18 718 aaKnown RBP21.31■■□□□ 1
SMC4-211ENST00000469858 MXD3Q9BW11 206 aa21.31■■□□□ 1
SMC4-211ENST00000469858 SCN9AQ15858 1988 aa21.3■■□□□ 1
SMC4-211ENST00000469858 GPR75-ASB3A0A0A6YYF3 556 aa21.3■■□□□ 1
SMC4-211ENST00000469858 CTDNEP1O95476 244 aa21.3■■□□□ 1
SMC4-211ENST00000469858 CYP2D6P10635 497 aa21.3■■□□□ 1
SMC4-211ENST00000469858 DPEP1P16444 411 aa21.3■■□□□ 1
SMC4-211ENST00000469858 FOXD4L6Q3SYB3 417 aaPredicted RBP21.3■■□□□ 1
SMC4-211ENST00000469858 FOXD4L3Q6VB84 417 aaPredicted RBP21.3■■□□□ 1
SMC4-211ENST00000469858 PODNQ7Z5L7 613 aa21.3■■□□□ 1
SMC4-211ENST00000469858 SMARCC2Q8TAQ2 1214 aa21.3■■□□□ 1
SMC4-211ENST00000469858 ZKSCAN3Q9BRR0 538 aa21.3■■□□□ 1
SMC4-211ENST00000469858 LY9Q9HBG7 655 aa21.3■■□□□ 1
SMC4-211ENST00000469858 SENP2Q9HC62 589 aa21.3■■□□□ 1
SMC4-211ENST00000469858 MTMR6Q9Y217 621 aa21.3■■□□□ 1
SMC4-211ENST00000469858 ATF5Q9Y2D1 282 aaPredicted RBP21.3■■□□□ 1
SMC4-211ENST00000469858 TCHHQ07283 1943 aa21.3■■□□□ 1
SMC4-211ENST00000469858 PTPDC1A2A3K4 754 aa21.3■■□□□ 1
SMC4-211ENST00000469858 SLC4A8Q2Y0W8 1093 aa21.3■■□□□ 1
SMC4-211ENST00000469858 NFXL1Q6ZNB6 911 aa21.3■■□□□ 1
SMC4-211ENST00000469858 CERS3Q8IU89 383 aa21.3■■□□□ 1
SMC4-211ENST00000469858 TGFBRAP1Q8WUH2 860 aa21.3■■□□□ 1
SMC4-211ENST00000469858 ESR2Q92731 530 aa21.3■■□□□ 1
SMC4-211ENST00000469858 HPS5Q9UPZ3 1129 aa21.3■■□□□ 1
SMC4-211ENST00000469858 SUGT1Q9Y2Z0 365 aa21.3■■□□□ 1
SMC4-211ENST00000469858 ECE2O60344 883 aa21.29■■□□□ 1
SMC4-211ENST00000469858 F13A1P00488 732 aa21.29■■□□□ 1
SMC4-211ENST00000469858 USP17L8P0C7I0 530 aa21.29■■□□□ 1
SMC4-211ENST00000469858 SART3Q15020 963 aaKnown RBP21.29■■□□□ 1
SMC4-211ENST00000469858 AOC3Q16853 763 aa21.29■■□□□ 1
SMC4-211ENST00000469858 SBK1Q52WX2 424 aa21.29■■□□□ 1
SMC4-211ENST00000469858 CHMP4CQ96CF2 233 aa21.29■■□□□ 1
SMC4-211ENST00000469858 FAM163AQ96GL9 167 aaPredicted RBP21.29■■□□□ 1
SMC4-211ENST00000469858 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
SMC4-211ENST00000469858 GAKO14976 1311 aa21.29■■□□□ 1
SMC4-211ENST00000469858 TRAK2O60296 914 aa21.28■■□□□ 1
SMC4-211ENST00000469858 PRDM1O75626 825 aa21.28■■□□□ 1
SMC4-211ENST00000469858 ILDR1Q86SU0 546 aaPredicted RBP21.28■■□□□ 1
SMC4-211ENST00000469858 FAM184AQ8NB25 1140 aa21.28■■□□□ 1
SMC4-211ENST00000469858 KCNQ5Q9NR82 932 aa21.28■■□□□ 1
SMC4-211ENST00000469858 TTF2Q9UNY4 1162 aaKnown RBP21.28■■□□□ 1
SMC4-211ENST00000469858 ADAMTSL1Q8N6G6 1762 aa21.28■■□□□ 1
SMC4-211ENST00000469858 PCP11498 1178 aaKnown RBP21.28■■□□□ 1
SMC4-211ENST00000469858 PTMSP20962 102 aa21.28■■□□□ 1
SMC4-211ENST00000469858 KCNA3P22001 575 aa21.28■■□□□ 1
SMC4-211ENST00000469858 LIFRP42702 1097 aa21.28■■□□□ 1
SMC4-211ENST00000469858 HMGN5P82970 282 aaKnown RBP21.28■■□□□ 1
SMC4-211ENST00000469858 APOA5Q6Q788 366 aa21.28■■□□□ 1
SMC4-211ENST00000469858 SGMS1Q86VZ5 419 aa21.28■■□□□ 1
SMC4-211ENST00000469858 DAGLAQ9Y4D2 1042 aa21.28■■□□□ 1
SMC4-211ENST00000469858 ERICH2A1L162 156 aa21.27■■□□□ 1
SMC4-211ENST00000469858 PPFIA3O75145 1194 aa21.27■■□□□ 1
SMC4-211ENST00000469858 SLC3A2P08195 630 aaKnown RBP21.27■■□□□ 1
SMC4-211ENST00000469858 PLCG2P16885 1265 aa21.27■■□□□ 1
SMC4-211ENST00000469858 CDC37L1Q7L3B6 337 aa21.27■■□□□ 1
SMC4-211ENST00000469858 MAPKAPK5Q8IW41 473 aa21.27■■□□□ 1
SMC4-211ENST00000469858 TEX11Q8IYF3 940 aa21.27■■□□□ 1
SMC4-211ENST00000469858 SUPT20HQ8NEM7 779 aa21.27■■□□□ 1
SMC4-211ENST00000469858 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
SMC4-211ENST00000469858 MTFR1LQ9H019 292 aa21.27■■□□□ 1
SMC4-211ENST00000469858 ZNF646O15015 1829 aaPredicted RBP21.27■■□□□ 1
SMC4-211ENST00000469858 FOCADQ5VW36 1801 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 CCDC69A6NI79 296 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 DHX16O60231 1041 aaKnown RBP21.27■□□□□ 0.99
SMC4-211ENST00000469858 RANBP6O60518 1105 aaKnown RBP21.27■□□□□ 0.99
SMC4-211ENST00000469858 FGRP09769 529 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 PDIA4P13667 645 aaKnown RBP21.27■□□□□ 0.99
SMC4-211ENST00000469858 RXRAP19793 462 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 POLD1P28340 1107 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 WTAPQ15007 396 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 R3HDM1Q15032 1099 aaKnown RBP21.27■□□□□ 0.99
SMC4-211ENST00000469858 CCDC93Q567U6 631 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 MICU3Q86XE3 530 aa21.27■□□□□ 0.99
SMC4-211ENST00000469858 MYH1P12882 1939 aa21.26■□□□□ 0.99
SMC4-211ENST00000469858 METAP2P50579 478 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMC4-211ENST00000469858 RHBDL3P58872 404 aa21.26■□□□□ 0.99
SMC4-211ENST00000469858 KIAA2012Q0VF49 1180 aa21.26■□□□□ 0.99
SMC4-211ENST00000469858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.26■□□□□ 0.992e-144■■■■■ 553.7
SMC4-211ENST00000469858 DDX60LQ5H9U9 1706 aaKnown RBP21.26■□□□□ 0.99
SMC4-211ENST00000469858 GOLGB1Q14789 3259 aaKnown RBP21.25■□□□□ 0.99
SMC4-211ENST00000469858 CPLX1O14810 134 aa21.25■□□□□ 0.99
SMC4-211ENST00000469858 ZBTB43O43298 467 aa21.25■□□□□ 0.99
SMC4-211ENST00000469858 SCNN1DP51172 638 aa21.25■□□□□ 0.99
SMC4-211ENST00000469858 C12orf60Q5U649 245 aa21.25■□□□□ 0.99
SMC4-211ENST00000469858 AMOTL1Q8IY63 956 aa21.25■□□□□ 0.99
SMC4-211ENST00000469858 MTA3Q9BTC8 594 aa21.25■□□□□ 0.99
SMC4-211ENST00000469858 SLC12A7Q9Y666 1083 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms