RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 BTDP43251 543 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 RHBDL3P58872 404 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 CAP1Q01518 475 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 SNAPC2Q13487 334 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 TAF1CQ15572 869 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-208ENST00000469802 TNNI3KQ59H18 835 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 GORABQ5T7V8 394 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 SH3BP5LQ7L8J4 393 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 NSUN4Q96CB9 384 aaKnown RBP20.09■□□□□ 0.81
COL9A3-208ENST00000469802 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
COL9A3-208ENST00000469802 FPGT-TNNI3KV9GXZ4 949 aa20.09■□□□□ 0.81
COL9A3-208ENST00000469802 UQCRFS1P1P0C7P4 283 aa20.08■□□□□ 0.81
COL9A3-208ENST00000469802 MAP3K10Q02779 954 aa20.08■□□□□ 0.81
COL9A3-208ENST00000469802 CD99L2Q8TCZ2 262 aa20.08■□□□□ 0.81
COL9A3-208ENST00000469802 KCNH4Q9UQ05 1017 aa20.08■□□□□ 0.81
COL9A3-208ENST00000469802 TRIM17Q9Y577 477 aa20.08■□□□□ 0.81
COL9A3-208ENST00000469802 PDE4DIPQ5VU43 2346 aa20.07■□□□□ 0.8
COL9A3-208ENST00000469802 PHF20L1A8MW92 1017 aa20.07■□□□□ 0.8
COL9A3-208ENST00000469802 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
COL9A3-208ENST00000469802 SP3Q02447 781 aa20.07■□□□□ 0.8
COL9A3-208ENST00000469802 TBC1D9Q6ZT07 1266 aa20.07■□□□□ 0.8
COL9A3-208ENST00000469802 DBNDD2Q9BQY9 259 aa20.07■□□□□ 0.8
COL9A3-208ENST00000469802 ZFYVE28Q9HCC9 887 aa20.07■□□□□ 0.8
COL9A3-208ENST00000469802 BTBD19C9JJ37 291 aa20.06■□□□□ 0.8
COL9A3-208ENST00000469802 SURF6O75683 361 aaKnown RBP20.06■□□□□ 0.8
COL9A3-208ENST00000469802 MGAMO43451 1857 aa20.05■□□□□ 0.8
COL9A3-208ENST00000469802 CENPFP49454 3210 aa20.05■□□□□ 0.8
COL9A3-208ENST00000469802 DDTLA6NHG4 134 aaPredicted RBP20.05■□□□□ 0.8
COL9A3-208ENST00000469802 MAP4K4O95819 1239 aaPredicted RBP20.05■□□□□ 0.8
COL9A3-208ENST00000469802 GSTO1P78417 241 aa20.05■□□□□ 0.8
COL9A3-208ENST00000469802 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
COL9A3-208ENST00000469802 CEP85Q6P2H3 762 aa20.05■□□□□ 0.8
COL9A3-208ENST00000469802 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.05■□□□□ 0.8
COL9A3-208ENST00000469802 PANK1Q8TE04 598 aa20.05■□□□□ 0.8
COL9A3-208ENST00000469802 ZNF512BQ96KM6 892 aaPredicted RBP20.05■□□□□ 0.8
COL9A3-208ENST00000469802 LOC285556D6RIA3 1793 aa20.05■□□□□ 0.8
COL9A3-208ENST00000469802 TLR2O60603 784 aa20.04■□□□□ 0.8
COL9A3-208ENST00000469802 LDHCP07864 332 aa20.04■□□□□ 0.8
COL9A3-208ENST00000469802 MOGSQ13724 837 aa20.04■□□□□ 0.8
COL9A3-208ENST00000469802 DBNLQ9UJU6 430 aaKnown RBP20.04■□□□□ 0.8
COL9A3-208ENST00000469802 PTPN22Q9Y2R2 807 aa20.04■□□□□ 0.8
COL9A3-208ENST00000469802 ADGRA2Q96PE1 1338 aa20.03■□□□□ 0.8
COL9A3-208ENST00000469802 PICALMQ13492 652 aa20.03■□□□□ 0.8
COL9A3-208ENST00000469802 ANKRD23Q86SG2 305 aa20.03■□□□□ 0.8
COL9A3-208ENST00000469802 SCYL3Q8IZE3 742 aa20.03■□□□□ 0.8
COL9A3-208ENST00000469802 EFCC1Q9HA90 598 aa20.03■□□□□ 0.8
COL9A3-208ENST00000469802 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
COL9A3-208ENST00000469802 CCDC158Q5M9N0 1113 aa20.02■□□□□ 0.8
COL9A3-208ENST00000469802 TTC39AQ5SRH9 613 aa20.02■□□□□ 0.8
COL9A3-208ENST00000469802 ZSCAN29Q8IWY8 852 aaPredicted RBP20.02■□□□□ 0.8
COL9A3-208ENST00000469802 TLR7Q9NYK1 1049 aaKnown RBP20.02■□□□□ 0.8
COL9A3-208ENST00000469802 CYP2E1P05181 493 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-208ENST00000469802 SLURP2P0DP57 97 aa20.01■□□□□ 0.79
COL9A3-208ENST00000469802 EAF2Q96CJ1 260 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-208ENST00000469802 SNRKQ9NRH2 765 aa20.01■□□□□ 0.79
COL9A3-208ENST00000469802 LRP2BPQ9P2M1 347 aa20.01■□□□□ 0.79
COL9A3-208ENST00000469802 MYH1P12882 1939 aa20.01■□□□□ 0.79
COL9A3-208ENST00000469802 DDX60LQ5H9U9 1706 aaKnown RBP20■□□□□ 0.79
COL9A3-208ENST00000469802 CXCL11O14625 94 aa20■□□□□ 0.79
COL9A3-208ENST00000469802 TBC1D12O60347 775 aa20■□□□□ 0.79
COL9A3-208ENST00000469802 IGSF3O75054 1194 aa20■□□□□ 0.79
COL9A3-208ENST00000469802 PTPRAP18433 802 aa20■□□□□ 0.79
COL9A3-208ENST00000469802 ARMC5Q96C12 935 aa20■□□□□ 0.79
COL9A3-208ENST00000469802 OSBPL5Q9H0X9 879 aaPredicted RBP20■□□□□ 0.79
COL9A3-208ENST00000469802 KIAA0100Q14667 2235 aaKnown RBP19.99■□□□□ 0.79
COL9A3-208ENST00000469802 CTNND1O60716 968 aaKnown RBP19.99■□□□□ 0.79
COL9A3-208ENST00000469802 MS4A1P11836 297 aa19.99■□□□□ 0.79
COL9A3-208ENST00000469802 ADGRA1Q86SQ6 560 aa19.99■□□□□ 0.79
COL9A3-208ENST00000469802 BRCA2P51587 3418 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 A0A0G2JLL6 359 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-208ENST00000469802 PDHXO00330 501 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 ZAP70P43403 619 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 LACTBP83111 547 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-208ENST00000469802 NAA16Q6N069 864 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-208ENST00000469802 GPAT2Q6NUI2 795 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 C17orf99Q6UX52 265 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 PRRT2Q7Z6L0 340 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-208ENST00000469802 CCDC8Q9H0W5 538 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-208ENST00000469802 PIH1D3Q9NQM4 214 aaKnown RBP19.98■□□□□ 0.79
COL9A3-208ENST00000469802 PICK1Q9NRD5 415 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 EXOC6BQ9Y2D4 811 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 AFG3L2Q9Y4W6 797 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 ZHX2Q9Y6X8 837 aa19.98■□□□□ 0.79
COL9A3-208ENST00000469802 PPP4CP60510 307 aa19.97■□□□□ 0.79
COL9A3-208ENST00000469802 ARHGEF6Q15052 776 aa19.97■□□□□ 0.79
COL9A3-208ENST00000469802 ERC1Q8IUD2 1116 aa19.97■□□□□ 0.79
COL9A3-208ENST00000469802 TEX11Q8IYF3 940 aa19.97■□□□□ 0.79
COL9A3-208ENST00000469802 SH3RF3Q8TEJ3 882 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-208ENST00000469802 ARHGAP39Q9C0H5 1083 aa19.97■□□□□ 0.79
COL9A3-208ENST00000469802 AATFQ9NY61 560 aaKnown RBP eCLIP19.96■□□□□ 0.79
COL9A3-208ENST00000469802 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-208ENST00000469802 NAV1Q8NEY1 1877 aa19.95■□□□□ 0.78
COL9A3-208ENST00000469802 FAM196BA6NMK8 535 aa19.95■□□□□ 0.78
COL9A3-208ENST00000469802 BAG3O95817 575 aa19.95■□□□□ 0.78
COL9A3-208ENST00000469802 PLCG2P16885 1265 aa19.95■□□□□ 0.78
COL9A3-208ENST00000469802 PARK7Q99497 189 aaKnown RBP19.95■□□□□ 0.78
COL9A3-208ENST00000469802 NOL10Q9BSC4 688 aaKnown RBP19.95■□□□□ 0.78
COL9A3-208ENST00000469802 ZBTB40Q9NUA8 1239 aa19.95■□□□□ 0.78
COL9A3-208ENST00000469802 DDX19BQ9UMR2 479 aa19.95■□□□□ 0.78
COL9A3-208ENST00000469802 PTCH2Q9Y6C5 1203 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms