RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 VPS37DQ86XT2 251 aa18.73■□□□□ 0.59
C19orf54-202ENST00000469741 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
C19orf54-202ENST00000469741 TMEM87AQ8NBN3 555 aa18.73■□□□□ 0.59
C19orf54-202ENST00000469741 GRPEL1Q9HAV7 217 aa18.73■□□□□ 0.59
C19orf54-202ENST00000469741 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
C19orf54-202ENST00000469741 CTNNA3Q9UI47 895 aa18.73■□□□□ 0.59
C19orf54-202ENST00000469741 F13A1P00488 732 aa18.72■□□□□ 0.59
C19orf54-202ENST00000469741 CAVIN4Q5BKX8 364 aa18.72■□□□□ 0.59
C19orf54-202ENST00000469741 STOX1Q6ZVD7 989 aa18.72■□□□□ 0.59
C19orf54-202ENST00000469741 RBM46Q8TBY0 533 aaKnown RBP18.72■□□□□ 0.59
C19orf54-202ENST00000469741 TCEANC2Q96MN5 208 aa18.72■□□□□ 0.59
C19orf54-202ENST00000469741 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
C19orf54-202ENST00000469741 MYH7P12883 1935 aa18.72■□□□□ 0.59
C19orf54-202ENST00000469741 ITGBL1O95965 494 aaPredicted RBP18.71■□□□□ 0.59
C19orf54-202ENST00000469741 USP17L8P0C7I0 530 aa18.71■□□□□ 0.59
C19orf54-202ENST00000469741 PDCP20941 246 aa18.71■□□□□ 0.59
C19orf54-202ENST00000469741 ZNF280AP59817 542 aaPredicted RBP18.71■□□□□ 0.59
C19orf54-202ENST00000469741 AGBL3Q8NEM8 1001 aa18.71■□□□□ 0.59
C19orf54-202ENST00000469741 CHAMP1Q96JM3 812 aa18.71■□□□□ 0.59
C19orf54-202ENST00000469741 MTMR6Q9Y217 621 aa18.71■□□□□ 0.59
C19orf54-202ENST00000469741 FAM205AQ6ZU69 1335 aa18.71■□□□□ 0.59
C19orf54-202ENST00000469741 H7C1D1 291 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
C19orf54-202ENST00000469741 EXOSC10Q01780 885 aaKnown RBP18.7■□□□□ 0.58
C19orf54-202ENST00000469741 RASGRF1Q13972 1273 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 MFSD14BQ5SR56 506 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 CAVIN1Q6NZI2 390 aaKnown RBP18.7■□□□□ 0.58
C19orf54-202ENST00000469741 Q6ZUG5 572 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 GAS2L3Q86XJ1 694 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 AGXT2Q9BYV1 514 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 MYH13Q9UKX3 1938 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 RPS12P25398 132 aaKnown RBP18.7■□□□□ 0.58
C19orf54-202ENST00000469741 CHADLQ6NUI6 762 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 LDHDQ86WU2 507 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 GLIS2Q9BZE0 524 aaPredicted RBP18.7■□□□□ 0.58
C19orf54-202ENST00000469741 MYOZ2Q9NPC6 264 aa18.7■□□□□ 0.58
C19orf54-202ENST00000469741 LAMA4Q16363 1823 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 MYO5AQ9Y4I1 1855 aaKnown RBP18.69■□□□□ 0.58
C19orf54-202ENST00000469741 E7EWF7 191 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 ADD2P35612 726 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 UBE3CQ15386 1083 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 KIF4BQ2VIQ3 1234 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 ZSCAN23Q3MJ62 389 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 USP50Q70EL3 339 aaPredicted RBP18.69■□□□□ 0.58
C19orf54-202ENST00000469741 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 GTF3C6Q969F1 213 aa18.69■□□□□ 0.58
C19orf54-202ENST00000469741 FOXP2O15409 715 aa18.68■□□□□ 0.58
C19orf54-202ENST00000469741 PRDX5P30044 214 aa18.68■□□□□ 0.58
C19orf54-202ENST00000469741 PRAMEF18Q5VWM3 479 aa18.68■□□□□ 0.58
C19orf54-202ENST00000469741 LARP1BQ659C4 914 aaKnown RBP18.68■□□□□ 0.58
C19orf54-202ENST00000469741 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
C19orf54-202ENST00000469741 PUS7LQ9H0K6 701 aaKnown RBP18.68■□□□□ 0.58
C19orf54-202ENST00000469741 WNT10BO00744 389 aa18.67■□□□□ 0.58
C19orf54-202ENST00000469741 IMMTQ16891 758 aaKnown RBP18.67■□□□□ 0.58
C19orf54-202ENST00000469741 USP48Q86UV5 1035 aa18.67■□□□□ 0.58
C19orf54-202ENST00000469741 PNMA8AQ86V59 439 aaPredicted RBP18.67■□□□□ 0.58
C19orf54-202ENST00000469741 PRMT6Q96LA8 375 aaPredicted RBP18.67■□□□□ 0.58
C19orf54-202ENST00000469741 PIH1D3Q9NQM4 214 aaKnown RBP18.67■□□□□ 0.58
C19orf54-202ENST00000469741 ADM5C9JUS6 153 aa18.66■□□□□ 0.58
C19orf54-202ENST00000469741 GPAA1O43292 621 aa18.66■□□□□ 0.58
C19orf54-202ENST00000469741 PFKFB2O60825 505 aa18.66■□□□□ 0.58
C19orf54-202ENST00000469741 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
C19orf54-202ENST00000469741 SLC9C2Q5TAH2 1124 aa18.66■□□□□ 0.58
C19orf54-202ENST00000469741 ZNF384Q8TF68 577 aa18.66■□□□□ 0.58
C19orf54-202ENST00000469741 ZBED3Q96IU2 234 aaPredicted RBP18.66■□□□□ 0.58
C19orf54-202ENST00000469741 LLPHQ9BRT6 129 aaKnown RBP18.66■□□□□ 0.58
C19orf54-202ENST00000469741 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
C19orf54-202ENST00000469741 TTF2Q9UNY4 1162 aaKnown RBP18.66■□□□□ 0.58
C19orf54-202ENST00000469741 FGAP02671 866 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 ANGEL2Q5VTE6 544 aaKnown RBP18.65■□□□□ 0.58
C19orf54-202ENST00000469741 BRF1Q92994 677 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 CHMP4CQ96CF2 233 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 PASKQ96RG2 1323 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 FGD1P98174 961 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 SPATA5Q8NB90 893 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 SYAP1Q96A49 352 aaPredicted RBP18.65■□□□□ 0.58
C19orf54-202ENST00000469741 GGA3Q9NZ52 723 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 TMEM63CQ9P1W3 806 aa18.65■□□□□ 0.58
C19orf54-202ENST00000469741 PDE6AP16499 860 aa18.64■□□□□ 0.57
C19orf54-202ENST00000469741 STK3Q13188 491 aa18.64■□□□□ 0.57
C19orf54-202ENST00000469741 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
C19orf54-202ENST00000469741 CNPY2Q9Y2B0 182 aa18.64■□□□□ 0.57
C19orf54-202ENST00000469741 TCRBV5S4A2TA0A5A2 114 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 VPS37CA5D8V6 355 aaPredicted RBP18.63■□□□□ 0.57
C19orf54-202ENST00000469741 EVCP57679 992 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 FSTL1Q12841 308 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 CST9Q5W186 159 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 ZNF274Q96GC6 653 aaPredicted RBP18.63■□□□□ 0.57
C19orf54-202ENST00000469741 WDR19Q8NEZ3 1342 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 CLRN2A0PK11 232 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
C19orf54-202ENST00000469741 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
C19orf54-202ENST00000469741 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
C19orf54-202ENST00000469741 SMARCC2Q8TAQ2 1214 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 PANK2Q9BZ23 570 aa18.63■□□□□ 0.57
C19orf54-202ENST00000469741 RBM27Q9P2N5 1060 aaKnown RBP18.63■□□□□ 0.57
C19orf54-202ENST00000469741 DOCK2Q92608 1830 aa18.62■□□□□ 0.57
C19orf54-202ENST00000469741 TCHHQ07283 1943 aa18.62■□□□□ 0.57
C19orf54-202ENST00000469741 ZNF532Q9HCE3 1301 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms