RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 SLITRK4Q8IW52 837 aa6.51□□□□□ -1.37
VPS8-220ENST00000469713 AGGF1Q8N302 714 aaeCLIP6.51□□□□□ -1.37
VPS8-220ENST00000469713 DRC1Q96MC2 740 aa6.51□□□□□ -1.37
VPS8-220ENST00000469713 TMPRSS13Q9BYE2 586 aa6.51□□□□□ -1.37
VPS8-220ENST00000469713 MRPL18Q9H0U6 180 aaKnown RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 RAD18Q9NS91 495 aa6.51□□□□□ -1.37
VPS8-220ENST00000469713 PPP1R1BQ9UD71 204 aaPredicted RBP6.51□□□□□ -1.37
VPS8-220ENST00000469713 PCDHGC5Q9Y5F6 944 aa6.51□□□□□ -1.37
VPS8-220ENST00000469713 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 FGRP09769 529 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 SPATA31C1P0DKV0 1188 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 CWF19L2Q2TBE0 894 aaKnown RBP6.5□□□□□ -1.37
VPS8-220ENST00000469713 AKAP4Q5JQC9 854 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 DIEXFQ68CQ4 756 aaKnown RBP6.5□□□□□ -1.37
VPS8-220ENST00000469713 MCF2L2Q86YR7 1114 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 PLPPR2Q96GM1 343 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 SCARF2Q96GP6 870 aaPredicted RBP6.5□□□□□ -1.37
VPS8-220ENST00000469713 SEC16BQ96JE7 1060 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS8-220ENST00000469713 RNF208Q9H0X6 261 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
VPS8-220ENST00000469713 CSADQ9Y600 493 aa6.5□□□□□ -1.37
VPS8-220ENST00000469713 MEGF11A6BM72 1044 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 GFRA2O00451 464 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 ALX3O95076 343 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 MCM4P33991 863 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 SOX9P48436 509 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 HNRNPUQ00839 825 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS8-220ENST00000469713 ZC3H12AQ5D1E8 599 aaKnown RBP6.49□□□□□ -1.37
VPS8-220ENST00000469713 NUTM2GQ5VZR2 741 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 ELMO3Q96BJ8 720 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 PPP1R9AQ9ULJ8 1098 aa6.49□□□□□ -1.37
VPS8-220ENST00000469713 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
VPS8-220ENST00000469713 TMPRSS2O15393 492 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 GRIN3BO60391 1043 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 SLFN14P0C7P3 912 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 COL9A2Q14055 689 aaPredicted RBP6.48□□□□□ -1.37
VPS8-220ENST00000469713 CCDC81Q6ZN84 652 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 GK5Q6ZS86 529 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 HDXQ7Z353 690 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 C12orf40Q86WS4 652 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 USP21Q9UK80 565 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
VPS8-220ENST00000469713 PRAMEF27A3QJZ7 478 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 ITGB2P05107 769 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 ADH5P11766 374 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 DRD2P14416 443 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 ATP2B1P20020 1258 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 ID3Q02535 119 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 CLCQ05315 142 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 GPAT2Q6NUI2 795 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 CYFIP1Q7L576 1253 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 TMEM130Q8N3G9 435 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 SMG8Q8ND04 991 aaKnown RBP6.47□□□□□ -1.37
VPS8-220ENST00000469713 DHX38Q92620 1227 aaKnown RBP6.47□□□□□ -1.37
VPS8-220ENST00000469713 LENG1Q96BZ8 264 aaPredicted RBP6.47□□□□□ -1.37
VPS8-220ENST00000469713 SUGCTQ9HAC7 445 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 CYP4F12Q9HCS2 524 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 CRIM1Q9NZV1 1036 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 AP4E1Q9UPM8 1137 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 HIF3AQ9Y2N7 669 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 PCDHB14Q9Y5E9 798 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 CORINQ9Y5Q5 1042 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 SYNGAP1Q96PV0 1343 aa6.47□□□□□ -1.37
VPS8-220ENST00000469713 TIAF1O95411 115 aa6.46□□□□□ -1.38
VPS8-220ENST00000469713 APBA3O96018 575 aa6.46□□□□□ -1.38
VPS8-220ENST00000469713 SSBP05455 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS8-220ENST00000469713 GTF2F1P35269 517 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS8-220ENST00000469713 ZNF165P49910 485 aa6.46□□□□□ -1.38
VPS8-220ENST00000469713 PPM1JQ5JR12 505 aa6.46□□□□□ -1.38
VPS8-220ENST00000469713 FDX2Q6P4F2 183 aa6.46□□□□□ -1.38
VPS8-220ENST00000469713 REXO1Q8N1G1 1221 aaKnown RBP6.46□□□□□ -1.38
VPS8-220ENST00000469713 C12orf50Q8NA57 414 aaPredicted RBP6.46□□□□□ -1.38
VPS8-220ENST00000469713 AKTIPQ9H8T0 292 aa6.46□□□□□ -1.38
VPS8-220ENST00000469713 NOS3P29474 1203 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 ERVK-24P63145 666 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 RING1Q06587 406 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 SOX4Q06945 474 aaPredicted RBP6.45□□□□□ -1.38
VPS8-220ENST00000469713 FBXW10Q5XX13 1052 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 DYMQ7RTS9 669 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 CPLX3Q8WVH0 158 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 UBXN4Q92575 508 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 FANCD2OSQ96PS1 177 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 NACC1Q96RE7 527 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 FERD3LQ96RJ6 166 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 SRRTQ9BXP5 876 aaKnown RBP6.45□□□□□ -1.38
VPS8-220ENST00000469713 PICK1Q9NRD5 415 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 DISC1Q9NRI5 854 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 MRVI1Q9Y6F6 885 aa6.45□□□□□ -1.38
VPS8-220ENST00000469713 C9orf172C9J069 976 aa6.44□□□□□ -1.38
VPS8-220ENST00000469713 HTR3BO95264 441 aa6.44□□□□□ -1.38
VPS8-220ENST00000469713 GLB1P16278 677 aa6.44□□□□□ -1.38
VPS8-220ENST00000469713 GRK4P32298 578 aa6.44□□□□□ -1.38
VPS8-220ENST00000469713 PREPP48147 710 aa6.44□□□□□ -1.38
VPS8-220ENST00000469713 ZBTB37Q5TC79 503 aa6.44□□□□□ -1.38
VPS8-220ENST00000469713 ANKRD34AQ69YU3 496 aa6.44□□□□□ -1.38
VPS8-220ENST00000469713 Q6ZS46 218 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms