RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 IDI2Q9BXS1 227 aa17.44■□□□□ 0.38
CALCA-204ENST00000469608 DDX4Q9NQI0 724 aaKnown RBP17.44■□□□□ 0.38
CALCA-204ENST00000469608 ZSWIM8A7E2V4 1837 aa17.43■□□□□ 0.38
CALCA-204ENST00000469608 ENTPD3O75355 529 aa17.43■□□□□ 0.38
CALCA-204ENST00000469608 GSTO1P78417 241 aa17.43■□□□□ 0.38
CALCA-204ENST00000469608 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
CALCA-204ENST00000469608 FAM163AQ96GL9 167 aaPredicted RBP17.43■□□□□ 0.38
CALCA-204ENST00000469608 ZFYVE28Q9HCC9 887 aa17.43■□□□□ 0.38
CALCA-204ENST00000469608 LRP2BPQ9P2M1 347 aa17.43■□□□□ 0.38
CALCA-204ENST00000469608 BTBD19C9JJ37 291 aa17.42■□□□□ 0.38
CALCA-204ENST00000469608 SP3Q02447 781 aa17.42■□□□□ 0.38
CALCA-204ENST00000469608 PPATQ06203 517 aa17.42■□□□□ 0.38
CALCA-204ENST00000469608 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
CALCA-204ENST00000469608 SH3BP5LQ7L8J4 393 aa17.42■□□□□ 0.38
CALCA-204ENST00000469608 NSUN4Q96CB9 384 aaKnown RBP17.42■□□□□ 0.38
CALCA-204ENST00000469608 GPR108Q9NPR9 543 aa17.42■□□□□ 0.38
CALCA-204ENST00000469608 ZNF112Q9UJU3 913 aa17.42■□□□□ 0.38
CALCA-204ENST00000469608 CDK5RAP2Q96SN8 1893 aa17.41■□□□□ 0.38
CALCA-204ENST00000469608 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
CALCA-204ENST00000469608 CENPFP49454 3210 aa17.41■□□□□ 0.38
CALCA-204ENST00000469608 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
CALCA-204ENST00000469608 DDTLA6NHG4 134 aaPredicted RBP17.41■□□□□ 0.38
CALCA-204ENST00000469608 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
CALCA-204ENST00000469608 RHBDL3P58872 404 aa17.41■□□□□ 0.38
CALCA-204ENST00000469608 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
CALCA-204ENST00000469608 NOL9Q5SY16 702 aaKnown RBP17.41■□□□□ 0.38
CALCA-204ENST00000469608 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
CALCA-204ENST00000469608 PTPRFP10586 1907 aa17.41■□□□□ 0.38
CALCA-204ENST00000469608 LDHCP07864 332 aa17.4■□□□□ 0.38
CALCA-204ENST00000469608 CAP1Q01518 475 aa17.4■□□□□ 0.38
CALCA-204ENST00000469608 EFCC1Q9HA90 598 aa17.4■□□□□ 0.38
CALCA-204ENST00000469608 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
CALCA-204ENST00000469608 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
CALCA-204ENST00000469608 PHIPQ8WWQ0 1821 aa17.4■□□□□ 0.38
CALCA-204ENST00000469608 ATAD5Q96QE3 1844 aa17.4■□□□□ 0.38
CALCA-204ENST00000469608 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
CALCA-204ENST00000469608 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.37
CALCA-204ENST00000469608 PICK1Q9NRD5 415 aa17.39■□□□□ 0.37
CALCA-204ENST00000469608 EXOC6BQ9Y2D4 811 aa17.39■□□□□ 0.37
CALCA-204ENST00000469608 KIAA0100Q14667 2235 aaKnown RBP17.39■□□□□ 0.37
CALCA-204ENST00000469608 FOCADQ5VW36 1801 aa17.38■□□□□ 0.37
CALCA-204ENST00000469608 FAM196BA6NMK8 535 aa17.38■□□□□ 0.37
CALCA-204ENST00000469608 PHF20L1A8MW92 1017 aa17.38■□□□□ 0.37
CALCA-204ENST00000469608 NAA16Q6N069 864 aaPredicted RBP17.38■□□□□ 0.37
CALCA-204ENST00000469608 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
CALCA-204ENST00000469608 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
CALCA-204ENST00000469608 ZCCHC17Q9NP64 241 aaKnown RBP17.38■□□□□ 0.37
CALCA-204ENST00000469608 KCNH4Q9UQ05 1017 aa17.38■□□□□ 0.37
CALCA-204ENST00000469608 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
CALCA-204ENST00000469608 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
CALCA-204ENST00000469608 MS4A1P11836 297 aa17.37■□□□□ 0.37
CALCA-204ENST00000469608 ZAP70P43403 619 aa17.37■□□□□ 0.37
CALCA-204ENST00000469608 SH3RF3Q8TEJ3 882 aaPredicted RBP17.37■□□□□ 0.37
CALCA-204ENST00000469608 EAF2Q96CJ1 260 aaPredicted RBP17.37■□□□□ 0.37
CALCA-204ENST00000469608 AATFQ9NY61 560 aaKnown RBP eCLIP17.37■□□□□ 0.37
CALCA-204ENST00000469608 PTPN22Q9Y2R2 807 aa17.37■□□□□ 0.37
CALCA-204ENST00000469608 SIPA1L1O43166 1804 aa17.36■□□□□ 0.37
CALCA-204ENST00000469608 PDHXO00330 501 aa17.36■□□□□ 0.37
CALCA-204ENST00000469608 TLR2O60603 784 aa17.36■□□□□ 0.37
CALCA-204ENST00000469608 ANKRD23Q86SG2 305 aa17.36■□□□□ 0.37
CALCA-204ENST00000469608 OSBPL5Q9H0X9 879 aaPredicted RBP17.36■□□□□ 0.37
CALCA-204ENST00000469608 PIH1D3Q9NQM4 214 aaKnown RBP17.36■□□□□ 0.37
CALCA-204ENST00000469608 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.36■□□□□ 0.37
CALCA-204ENST00000469608 COG6Q9Y2V7 657 aa17.36■□□□□ 0.37
CALCA-204ENST00000469608 ZHX2Q9Y6X8 837 aa17.36■□□□□ 0.37
CALCA-204ENST00000469608 COL2A1P02458 1487 aaPredicted RBP17.36■□□□□ 0.37
CALCA-204ENST00000469608 APBB1O00213 710 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
CALCA-204ENST00000469608 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
CALCA-204ENST00000469608 PTPRAP18433 802 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 MOGSQ13724 837 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
CALCA-204ENST00000469608 AACSQ86V21 672 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 ERC1Q8IUD2 1116 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 ZNF512BQ96KM6 892 aaPredicted RBP17.35■□□□□ 0.37
CALCA-204ENST00000469608 ARHGAP39Q9C0H5 1083 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.35■□□□□ 0.37
CALCA-204ENST00000469608 CPA4Q9UI42 421 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
CALCA-204ENST00000469608 BAG3O95817 575 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 MAP3K10Q02779 954 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 KIF22Q14807 665 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 ARHGEF6Q15052 776 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 GADL1Q6ZQY3 521 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 RBBP6Q7Z6E9 1792 aaKnown RBP17.34■□□□□ 0.37
CALCA-204ENST00000469608 ADGRA1Q86SQ6 560 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 IL1RAPL2Q9NP60 686 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 NDUFB9Q9Y6M9 179 aa17.34■□□□□ 0.37
CALCA-204ENST00000469608 TRIM75PA6NK02 468 aa17.33■□□□□ 0.36
CALCA-204ENST00000469608 CXCL11O14625 94 aa17.33■□□□□ 0.36
CALCA-204ENST00000469608 CTNND1O60716 968 aaKnown RBP17.33■□□□□ 0.36
CALCA-204ENST00000469608 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
CALCA-204ENST00000469608 LACTBP83111 547 aaPredicted RBP17.33■□□□□ 0.36
CALCA-204ENST00000469608 MAPKAPK5Q8IW41 473 aa17.33■□□□□ 0.36
CALCA-204ENST00000469608 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.36
CALCA-204ENST00000469608 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.36
CALCA-204ENST00000469608 MYH1P12882 1939 aa17.33■□□□□ 0.36
CALCA-204ENST00000469608 ADGRA2Q96PE1 1338 aa17.32■□□□□ 0.36
CALCA-204ENST00000469608 A0A0G2JLL6 359 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms