RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 INPP5BP32019 993 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.25
COL4A3-204ENST00000469504 SPATA5Q8NB90 893 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 ATRNL1Q5VV63 1379 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 BTDP43251 543 aa13.51□□□□□ -0.25
COL4A3-204ENST00000469504 RGS3P49796 1198 aa13.51□□□□□ -0.25
COL4A3-204ENST00000469504 LACTBP83111 547 aaPredicted RBP13.51□□□□□ -0.25
COL4A3-204ENST00000469504 FTSJ3Q8IY81 847 aaKnown RBP13.51□□□□□ -0.25
COL4A3-204ENST00000469504 SCYL3Q8IZE3 742 aa13.51□□□□□ -0.25
COL4A3-204ENST00000469504 PICK1Q9NRD5 415 aa13.51□□□□□ -0.25
COL4A3-204ENST00000469504 COL2A1P02458 1487 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-204ENST00000469504 PNMA6EA0A0J9YXQ4 647 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 TBC1D12O60347 775 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
COL4A3-204ENST00000469504 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL4A3-204ENST00000469504 MECOMQ03112 1051 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 FASTKD5Q7L8L6 764 aaKnown RBP13.5□□□□□ -0.25
COL4A3-204ENST00000469504 ZSCAN29Q8IWY8 852 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-204ENST00000469504 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
COL4A3-204ENST00000469504 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 PARK7Q99497 189 aaKnown RBP13.5□□□□□ -0.25
COL4A3-204ENST00000469504 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 HMG20BQ9P0W2 317 aa13.5□□□□□ -0.25
COL4A3-204ENST00000469504 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 PDHXO00330 501 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 SLC34A2O95436 690 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 HOXD10P28358 340 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 ATP8B2P98198 1209 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 SLC9C1Q4G0N8 1177 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 C17orf99Q6UX52 265 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 NSUN4Q96CB9 384 aaKnown RBP13.49□□□□□ -0.25
COL4A3-204ENST00000469504 ZNF333Q96JL9 665 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 ZNF512BQ96KM6 892 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-204ENST00000469504 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 HTTP42858 3142 aa13.49□□□□□ -0.25
COL4A3-204ENST00000469504 PLCG2P16885 1265 aa13.48□□□□□ -0.25
COL4A3-204ENST00000469504 PTPRAP18433 802 aa13.48□□□□□ -0.25
COL4A3-204ENST00000469504 RHBDL3P58872 404 aa13.48□□□□□ -0.25
COL4A3-204ENST00000469504 TMED8Q6PL24 325 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-204ENST00000469504 ZFPM1Q8IX07 1006 aa13.48□□□□□ -0.25
COL4A3-204ENST00000469504 NOL10Q9BSC4 688 aaKnown RBP13.48□□□□□ -0.25
COL4A3-204ENST00000469504 NOP58Q9Y2X3 529 aaKnown RBP13.48□□□□□ -0.25
COL4A3-204ENST00000469504 MYH2Q9UKX2 1941 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 ZBED9Q6R2W3 1325 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 A0A0G2JLL6 359 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-204ENST00000469504 BAG3O95817 575 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 MCAMP43121 646 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-204ENST00000469504 PICALMQ13492 652 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 SH3BP5LQ7L8J4 393 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 PRRT2Q7Z6L0 340 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-204ENST00000469504 OSBPL5Q9H0X9 879 aaPredicted RBP13.47□□□□□ -0.25
COL4A3-204ENST00000469504 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 AFG3L2Q9Y4W6 797 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
COL4A3-204ENST00000469504 DOCK2Q92608 1830 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 ADGRA2Q96PE1 1338 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.25
COL4A3-204ENST00000469504 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
COL4A3-204ENST00000469504 MS4A1P11836 297 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 MOGSQ13724 837 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 DIEXFQ68CQ4 756 aaKnown RBP13.46□□□□□ -0.25
COL4A3-204ENST00000469504 CERS3Q8IU89 383 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 ITPRIPQ8IWB1 547 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 GCC1Q96CN9 775 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 DHX36Q9H2U1 1008 aaKnown RBP13.46□□□□□ -0.25
COL4A3-204ENST00000469504 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.25
COL4A3-204ENST00000469504 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
COL4A3-204ENST00000469504 TNNQ9UQP3 1299 aa13.46□□□□□ -0.25
COL4A3-204ENST00000469504 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
COL4A3-204ENST00000469504 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
COL4A3-204ENST00000469504 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
COL4A3-204ENST00000469504 CAP1Q01518 475 aa13.45□□□□□ -0.26
COL4A3-204ENST00000469504 ERC1Q8IUD2 1116 aa13.45□□□□□ -0.26
COL4A3-204ENST00000469504 ZNF384Q8TF68 577 aa13.45□□□□□ -0.26
COL4A3-204ENST00000469504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL4A3-204ENST00000469504 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
COL4A3-204ENST00000469504 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
COL4A3-204ENST00000469504 POTEFA5A3E0 1075 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 BCRP11274 1271 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 CAPN2P17655 700 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 PSMC4P43686 418 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 FCGRTP55899 365 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 PPP4CP60510 307 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 NAA16Q6N069 864 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-204ENST00000469504 GPAT2Q6NUI2 795 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 TEX11Q8IYF3 940 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-204ENST00000469504 GINM1Q9NU53 330 aa13.44□□□□□ -0.26
COL4A3-204ENST00000469504 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms