RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 THSD7BQ9C0I4 1608 aa17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 COL2A1P02458 1487 aaPredicted RBP17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 AOC2O75106 756 aa17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 PICALMQ13492 652 aa17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 RASAL3Q86YV0 1011 aa17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 CSRNP1Q96S65 589 aa17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 ZNF341Q9BYN7 854 aa17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 DDX4Q9NQI0 724 aaKnown RBP17.91■□□□□ 0.46
TMEM39A-205ENST00000468676 MAP3K9P80192 1104 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 NUCB1Q02818 461 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 LRRFIP1Q32MZ4 808 aaKnown RBP17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 ZFPM1Q8IX07 1006 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 EDC3Q96F86 508 aaKnown RBP17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 DHX36Q9H2U1 1008 aaKnown RBP17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 WBP1LQ9NX94 342 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 STAP2Q9UGK3 403 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 FZD1Q9UP38 647 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 CSADQ9Y600 493 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 MYH7P12883 1935 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 ATRNL1Q5VV63 1379 aa17.9■□□□□ 0.46
TMEM39A-205ENST00000468676 MAGEB6P1A0A0J9YX57 407 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 ADD2P35612 726 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 CHD1LQ86WJ1 897 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 MIGA1Q8NAN2 632 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 PI4K2BQ8TCG2 481 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 AIDAQ96BJ3 306 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 SALL3Q9BXA9 1300 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 ZNF532Q9HCE3 1301 aa17.89■□□□□ 0.45
TMEM39A-205ENST00000468676 ZBTB48P10074 688 aaPredicted RBP17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 DYNLL1P63167 89 aaKnown RBP17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 MAP3K10Q02779 954 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 TSHZ3Q63HK5 1081 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 B4GALNT3Q6L9W6 998 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 MIGA2Q7L4E1 593 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 KBTBD3Q8NAB2 608 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 OTUD7AQ8TE49 926 aaPredicted RBP17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 TGFBRAP1Q8WUH2 860 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 WRNIP1Q96S55 665 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 LNPKQ9C0E8 428 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 FOCADQ5VW36 1801 aa17.88■□□□□ 0.45
TMEM39A-205ENST00000468676 CDK5RAP2Q96SN8 1893 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 DDTLA6NHG4 134 aaPredicted RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 CA12O43570 354 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 TBC1D12O60347 775 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 ZFYP08048 801 aaPredicted RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 HSPA1AP0DMV8 641 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 HSPA1BP0DMV9 641 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 PDE1AP54750 535 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 KIF23Q02241 960 aaPredicted RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 SPRYD7Q5W111 196 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 SH3BP5LQ7L8J4 393 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 CLMNQ96JQ2 1002 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 CRNKL1Q9BZJ0 848 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 ZNF112Q9UJU3 913 aa17.87■□□□□ 0.45
TMEM39A-205ENST00000468676 USP5P45974 858 aa17.86■□□□□ 0.45
TMEM39A-205ENST00000468676 VGLL4Q14135 290 aa17.86■□□□□ 0.45
TMEM39A-205ENST00000468676 MAPKAPK5Q8IW41 473 aa17.86■□□□□ 0.45
TMEM39A-205ENST00000468676 PI4KBQ9UBF8 816 aa17.86■□□□□ 0.45
TMEM39A-205ENST00000468676 FLT1P17948 1338 aa17.86■□□□□ 0.45
TMEM39A-205ENST00000468676 OTOFQ9HC10 1997 aa17.86■□□□□ 0.45
TMEM39A-205ENST00000468676 INHBEP58166 350 aa17.85■□□□□ 0.45
TMEM39A-205ENST00000468676 SREBF2Q12772 1141 aa17.85■□□□□ 0.45
TMEM39A-205ENST00000468676 TICAM2Q86XR7 235 aa17.85■□□□□ 0.45
TMEM39A-205ENST00000468676 WNK4Q96J92 1243 aa17.85■□□□□ 0.45
TMEM39A-205ENST00000468676 HERC5Q9UII4 1024 aaKnown RBP17.85■□□□□ 0.45
TMEM39A-205ENST00000468676 MANSC4A6NHS7 340 aaPredicted RBP17.84■□□□□ 0.45
TMEM39A-205ENST00000468676 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
TMEM39A-205ENST00000468676 ERO1BQ86YB8 467 aa17.84■□□□□ 0.45
TMEM39A-205ENST00000468676 FOXP4Q8IVH2 680 aaPredicted RBP17.84■□□□□ 0.45
TMEM39A-205ENST00000468676 ZKSCAN4Q969J2 545 aaPredicted RBP17.84■□□□□ 0.45
TMEM39A-205ENST00000468676 ZIC5Q96T25 663 aa17.84■□□□□ 0.45
TMEM39A-205ENST00000468676 ELP3Q9H9T3 547 aa17.84■□□□□ 0.45
TMEM39A-205ENST00000468676 MYH1P12882 1939 aa17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 PHF20L1A8MW92 1017 aa17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 RNF113AO15541 343 aaKnown RBP17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 HLA-DOAP06340 250 aa17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 TM4SF4P48230 202 aa17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 NOL9Q5SY16 702 aaKnown RBP17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 OPTNQ96CV9 577 aa17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 OSBPL3Q9H4L5 887 aa17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.83■□□□□ 0.44
TMEM39A-205ENST00000468676 SPDYE5A6NIY4 337 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 CTNND1O60716 968 aaKnown RBP17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 MBD4O95243 580 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 INPP5BP32019 993 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 CTCFP49711 727 aaPredicted RBP17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 TTC6Q86TZ1 520 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 APPBP2Q92624 585 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 EVI5LQ96CN4 794 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 FSD1Q9BTV5 496 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 TRIM34Q9BYJ4 488 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 SAGE1Q9NXZ1 904 aa17.82■□□□□ 0.44
TMEM39A-205ENST00000468676 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms