RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 TCP10Q12799 353 aa17.67■□□□□ 0.42
COL27A1-203ENST00000468565 AACSQ86V21 672 aa17.67■□□□□ 0.42
COL27A1-203ENST00000468565 SNRKQ9NRH2 765 aa17.67■□□□□ 0.42
COL27A1-203ENST00000468565 CSADQ9Y600 493 aa17.67■□□□□ 0.42
COL27A1-203ENST00000468565 RAB11FIP3O75154 756 aa17.66■□□□□ 0.42
COL27A1-203ENST00000468565 VGLL4Q14135 290 aa17.66■□□□□ 0.42
COL27A1-203ENST00000468565 ZNF341Q9BYN7 854 aa17.66■□□□□ 0.42
COL27A1-203ENST00000468565 ELP3Q9H9T3 547 aa17.66■□□□□ 0.42
COL27A1-203ENST00000468565 CYP2E1P05181 493 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-203ENST00000468565 RGS3P49796 1198 aa17.66■□□□□ 0.42
COL27A1-203ENST00000468565 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-203ENST00000468565 GJA5P36382 358 aa17.65■□□□□ 0.42
COL27A1-203ENST00000468565 RHBDL3P58872 404 aa17.65■□□□□ 0.42
COL27A1-203ENST00000468565 CLASRPQ8N2M8 674 aaKnown RBP17.65■□□□□ 0.42
COL27A1-203ENST00000468565 OPTNQ96CV9 577 aa17.65■□□□□ 0.42
COL27A1-203ENST00000468565 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
COL27A1-203ENST00000468565 CFHR5Q9BXR6 569 aa17.65■□□□□ 0.42
COL27A1-203ENST00000468565 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
COL27A1-203ENST00000468565 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-203ENST00000468565 ALDH1A1P00352 501 aa17.64■□□□□ 0.42
COL27A1-203ENST00000468565 ZAP70P43403 619 aa17.64■□□□□ 0.42
COL27A1-203ENST00000468565 COL2A1P02458 1487 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-203ENST00000468565 ZFPM1Q8IX07 1006 aa17.64■□□□□ 0.41
COL27A1-203ENST00000468565 ZNF112Q9UJU3 913 aa17.64■□□□□ 0.41
COL27A1-203ENST00000468565 SNCAIPQ9Y6H5 919 aa17.64■□□□□ 0.41
COL27A1-203ENST00000468565 ATRNL1Q5VV63 1379 aa17.63■□□□□ 0.41
COL27A1-203ENST00000468565 TESPA1A2RU30 521 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-203ENST00000468565 SPDYE5A6NIY4 337 aa17.63■□□□□ 0.41
COL27A1-203ENST00000468565 NOM1Q5C9Z4 860 aaKnown RBP17.63■□□□□ 0.41
COL27A1-203ENST00000468565 NAA16Q6N069 864 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-203ENST00000468565 MIGA2Q7L4E1 593 aa17.63■□□□□ 0.41
COL27A1-203ENST00000468565 IFNL1Q8IU54 200 aa17.63■□□□□ 0.41
COL27A1-203ENST00000468565 DDX4Q9NQI0 724 aaKnown RBP17.63■□□□□ 0.41
COL27A1-203ENST00000468565 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
COL27A1-203ENST00000468565 NOL10Q9BSC4 688 aaKnown RBP17.62■□□□□ 0.41
COL27A1-203ENST00000468565 PIH1D3Q9NQM4 214 aaKnown RBP17.62■□□□□ 0.41
COL27A1-203ENST00000468565 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
COL27A1-203ENST00000468565 APBB1O00213 710 aa17.62■□□□□ 0.41
COL27A1-203ENST00000468565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL27A1-203ENST00000468565 TBC1D8O95759 1140 aa17.61■□□□□ 0.41
COL27A1-203ENST00000468565 BAG3O95817 575 aa17.61■□□□□ 0.41
COL27A1-203ENST00000468565 PPP4CP60510 307 aa17.61■□□□□ 0.41
COL27A1-203ENST00000468565 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
COL27A1-203ENST00000468565 PICALMQ13492 652 aa17.61■□□□□ 0.41
COL27A1-203ENST00000468565 TMED8Q6PL24 325 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-203ENST00000468565 SH3BP5LQ7L8J4 393 aa17.61■□□□□ 0.41
COL27A1-203ENST00000468565 ZKSCAN4Q969J2 545 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-203ENST00000468565 MS4A4AQ96JQ5 239 aa17.61■□□□□ 0.41
COL27A1-203ENST00000468565 IGF2BP3O00425 579 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL27A1-203ENST00000468565 IFIT2P09913 472 aaKnown RBP17.6■□□□□ 0.41
COL27A1-203ENST00000468565 PLCG2P16885 1265 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 INPP5BP32019 993 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 GTF2A2P52657 109 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 NOL9Q5SY16 702 aaKnown RBP17.6■□□□□ 0.41
COL27A1-203ENST00000468565 OTUD7BQ6GQQ9 843 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 ZSCAN29Q8IWY8 852 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-203ENST00000468565 OTUD5Q96G74 571 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 MYH7P12883 1935 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 ATAD5Q96QE3 1844 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 DDTLA6NHG4 134 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-203ENST00000468565 PPIL2Q13356 520 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 TEX11Q8IYF3 940 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 MYH1P12882 1939 aa17.6■□□□□ 0.41
COL27A1-203ENST00000468565 SIPA1L1O43166 1804 aa17.59■□□□□ 0.41
COL27A1-203ENST00000468565 PHIPQ8WWQ0 1821 aa17.59■□□□□ 0.41
COL27A1-203ENST00000468565 PPATQ06203 517 aa17.59■□□□□ 0.41
COL27A1-203ENST00000468565 AATFQ9NY61 560 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL27A1-203ENST00000468565 PTPRFP10586 1907 aa17.59■□□□□ 0.41
COL27A1-203ENST00000468565 IDH1O75874 414 aaKnown RBP17.59■□□□□ 0.41
COL27A1-203ENST00000468565 ADGRA1Q86SQ6 560 aa17.59■□□□□ 0.41
COL27A1-203ENST00000468565 SH3RF3Q8TEJ3 882 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-203ENST00000468565 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
COL27A1-203ENST00000468565 OSBPL5Q9H0X9 879 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-203ENST00000468565 PHF20L1A8MW92 1017 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 GPR25O00155 361 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 TBC1D12O60347 775 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 MAP3K12Q12852 859 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-203ENST00000468565 BRI3BPQ8WY22 251 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 PTPN18Q99952 460 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
COL27A1-203ENST00000468565 CCL15-CCL14A0A0B4J2E2 113 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 DGKZQ13574 1117 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 CCL15Q16663 113 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 CERS3Q8IU89 383 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 ZNF296Q8WUU4 475 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-203ENST00000468565 ABHD8Q96I13 439 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 MCOLN1Q9GZU1 580 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 DCTPP1Q9H773 170 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 IRF6O14896 467 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 CETPP11597 493 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 CYP7A1P22680 504 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 SNAPC2Q13487 334 aa17.57■□□□□ 0.4
COL27A1-203ENST00000468565 MAGEB6Q8N7X4 407 aa17.56■□□□□ 0.4
COL27A1-203ENST00000468565 R3HDMLQ9H3Y0 253 aa17.56■□□□□ 0.4
COL27A1-203ENST00000468565 CTU1Q7Z7A3 348 aaKnown RBP17.55■□□□□ 0.4
COL27A1-203ENST00000468565 SCYL3Q8IZE3 742 aa17.55■□□□□ 0.4
COL27A1-203ENST00000468565 DHX36Q9H2U1 1008 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms