RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 APOBEC3HQ6NTF7 200 aaKnown RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 CDC42EP5Q6NZY7 148 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 DLK2Q6UY11 383 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 PAXIP1Q6ZW49 1069 aaPredicted RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 CHD1LQ86WJ1 897 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 SMC5Q8IY18 1101 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 MAGEB6Q8N7X4 407 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 PDCD7Q8N8D1 485 aaKnown RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 OTUD7AQ8TE49 926 aaPredicted RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 ZNF384Q8TF68 577 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 NSUN4Q96CB9 384 aaKnown RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 EDC3Q96F86 508 aaKnown RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 HAUS7Q99871 368 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 MRIQ9BWK5 157 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 LNPKQ9C0E8 428 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 DEFB129Q9H1M3 183 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 GBA2Q9HCG7 927 aaPredicted RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 PAG1Q9NWQ8 432 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 TLL2Q9Y6L7 1015 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 COL2A1P02458 1487 aaPredicted RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 DDX60LQ5H9U9 1706 aaKnown RBP4.4□□□□□ -1.71
COMMD3-207ENST00000468469 SALL3Q9BXA9 1300 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 CNTNAP1P78357 1384 aa4.4□□□□□ -1.71
COMMD3-207ENST00000468469 AKAP11Q9UKA4 1901 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 GPR75-ASB3A0A0A6YYF3 556 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 MAGEB6P1A0A0J9YX57 407 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 BAG3O95817 575 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 PDE6AP16499 860 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 RGS3P49796 1198 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 FKBP1BP68106 108 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 NUCB1Q02818 461 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 NFIAQ12857 509 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 TTLL12Q14166 644 aaPredicted RBP4.39□□□□□ -1.71
COMMD3-207ENST00000468469 RASA3Q14644 834 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 SUPT20HL1Q3ZLR7 823 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 SLC9C2Q5TAH2 1124 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 FKBP1CQ5VVH2 108 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 PRAMEF18Q5VWM3 479 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 CST9Q5W186 159 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 ZSCAN25Q6NSZ9 544 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 TMED8Q6PL24 325 aaPredicted RBP4.39□□□□□ -1.71
COMMD3-207ENST00000468469 ADGRA1Q86SQ6 560 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 SAPCD2Q86UD0 394 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 FAM83AQ86UY5 434 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 CERS3Q8IU89 383 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 ZSCAN29Q8IWY8 852 aaPredicted RBP4.39□□□□□ -1.71
COMMD3-207ENST00000468469 TEX11Q8IYF3 940 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 C2orf69Q8N8R5 385 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 MIGA1Q8NAN2 632 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 PI4K2BQ8TCG2 481 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 FSD1Q9BTV5 496 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 IDI2Q9BXS1 227 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 TMEM39BQ9GZU3 492 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 USP40Q9NVE5 1235 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 AATFQ9NY61 560 aaKnown RBP eCLIP4.39□□□□□ -1.71
COMMD3-207ENST00000468469 MKRN1Q9UHC7 482 aaKnown RBP4.39□□□□□ -1.71
COMMD3-207ENST00000468469 FLT1P17948 1338 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 ZNF532Q9HCE3 1301 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 ATRNL1Q5VV63 1379 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 TRPM7Q96QT4 1865 aa4.39□□□□□ -1.71
COMMD3-207ENST00000468469 OTOFQ9HC10 1997 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 RASSF10A6NK89 507 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 PPP1R12BO60237 982 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 ENTPD3O75355 529 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 WDHD1O75717 1129 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 MBD4O95243 580 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 MAP4K4O95819 1239 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 ADD2P35612 726 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 ECE1P42892 770 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 IREB2P48200 963 aaKnown RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 PDE1AP54750 535 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 HUNKP57058 714 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 RHBDL3P58872 404 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 TCP10Q12799 353 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 GRM1Q13255 1194 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 PRKG1Q13976 671 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 UBE3CQ15386 1083 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 LRRFIP1Q32MZ4 808 aaKnown RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 NBPF12Q5TAG4 269 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 DCAF15Q66K64 600 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 MOB2Q70IA6 237 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 CENPQQ7L2Z9 268 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 ARMC9Q7Z3E5 817 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 KBTBD3Q8NAB2 608 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 SH3RF3Q8TEJ3 882 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 FAM151AQ8WW52 585 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 HOOK2Q96ED9 719 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 HHIPL1Q96JK4 782 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 TEPSINQ96N21 525 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 CSRNP1Q96S65 589 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 OSBPL5Q9H0X9 879 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 DDX4Q9NQI0 724 aaKnown RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 FAM198AQ9UFP1 575 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 STAP2Q9UGK3 403 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 ANGEL1Q9UNK9 670 aaKnown RBP4.38□□□□□ -1.71
COMMD3-207ENST00000468469 NAV1Q8NEY1 1877 aa4.38□□□□□ -1.71
COMMD3-207ENST00000468469 MYH2Q9UKX2 1941 aa4.37□□□□□ -1.71
COMMD3-207ENST00000468469 TCRBV5S4A2TA0A5A2 114 aa4.37□□□□□ -1.71
COMMD3-207ENST00000468469 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms