RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ANP32EQ9BTT0 268 aa24.28■■□□□ 1.48
TMEM53-207ENST00000468117 GTF3C6Q969F1 213 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 KRT23Q9C075 422 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 ZSWIM5Q9P217 1185 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 PTGER2P43116 358 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 STRIP1Q5VSL9 837 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 TGFBRAP1Q8WUH2 860 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 PSMD1Q99460 953 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 RNF41Q9H4P4 317 aaPredicted RBP24.27■■□□□ 1.48
TMEM53-207ENST00000468117 MCM9Q9NXL9 1143 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 MKRN1Q9UHC7 482 aaKnown RBP24.27■■□□□ 1.48
TMEM53-207ENST00000468117 NAP1L2Q9ULW6 460 aaPredicted RBP24.27■■□□□ 1.48
TMEM53-207ENST00000468117 DAGLAQ9Y4D2 1042 aa24.27■■□□□ 1.48
TMEM53-207ENST00000468117 FOCADQ5VW36 1801 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 USP17L8P0C7I0 530 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 CYP2D6P10635 497 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 GJB2P29033 226 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 SCNN1DP51172 638 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 DACT2Q5SW24 774 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 CERS3Q8IU89 383 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 ARPP21Q9UBL0 812 aaPredicted RBP24.25■■□□□ 1.47
TMEM53-207ENST00000468117 ZDHHC9Q9Y397 364 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 UTRNP46939 3433 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 PSME4Q14997 1843 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 SCRN1Q12765 414 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 SLC4A8Q2Y0W8 1093 aa24.25■■□□□ 1.47
TMEM53-207ENST00000468117 DALRD3Q5D0E6 543 aaKnown RBP24.25■■□□□ 1.47
TMEM53-207ENST00000468117 ZNF277Q9NRM2 450 aaPredicted RBP24.25■■□□□ 1.47
TMEM53-207ENST00000468117 MYH1P12882 1939 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 USP17L3A6NCW0 530 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 USP17L4A6NCW7 530 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 PFKFB2O60825 505 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 PDIA3P30101 505 aaKnown RBP24.24■■□□□ 1.47
TMEM53-207ENST00000468117 EVCP57679 992 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 RHBDL3P58872 404 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 USP17L1Q7RTZ2 530 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 TEX11Q8IYF3 940 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 ZNF274Q96GC6 653 aaPredicted RBP24.24■■□□□ 1.47
TMEM53-207ENST00000468117 BRPF3Q9ULD4 1205 aa24.24■■□□□ 1.47
TMEM53-207ENST00000468117 ANGEL1Q9UNK9 670 aaKnown RBP24.24■■□□□ 1.47
TMEM53-207ENST00000468117 YDJCA8MPS7 323 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 PLCG2P16885 1265 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 SBK1Q52WX2 424 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 MAPKAPK5Q8IW41 473 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 FER1L6Q2WGJ9 1857 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 SH2B2O14492 632 aaPredicted RBP24.23■■□□□ 1.47
TMEM53-207ENST00000468117 CCT2P78371 535 aaKnown RBP24.23■■□□□ 1.47
TMEM53-207ENST00000468117 SOGA3Q5TF21 947 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 KIAA0825Q8IV33 1275 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 TMEM87BQ96K49 555 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 CD2APQ9Y5K6 639 aa24.23■■□□□ 1.47
TMEM53-207ENST00000468117 COL4A5P29400 1685 aa24.22■■□□□ 1.47
TMEM53-207ENST00000468117 KLF18A0A0U1RQI7 1052 aa24.22■■□□□ 1.47
TMEM53-207ENST00000468117 PRDM1O75626 825 aa24.22■■□□□ 1.47
TMEM53-207ENST00000468117 IGDCC4Q8TDY8 1250 aa24.22■■□□□ 1.47
TMEM53-207ENST00000468117 FKBP1AP62942 108 aaKnown RBP24.22■■□□□ 1.47
TMEM53-207ENST00000468117 FOXD4L5Q5VV16 416 aaPredicted RBP24.22■■□□□ 1.47
TMEM53-207ENST00000468117 LARGE2Q8N3Y3 721 aa24.22■■□□□ 1.47
TMEM53-207ENST00000468117 FOXD4L4Q8WXT5 416 aaPredicted RBP24.22■■□□□ 1.47
TMEM53-207ENST00000468117 ZKSCAN3Q9BRR0 538 aa24.22■■□□□ 1.47
TMEM53-207ENST00000468117 SENP2Q9HC62 589 aa24.22■■□□□ 1.47
TMEM53-207ENST00000468117 NCOA5Q9HCD5 579 aaKnown RBP24.22■■□□□ 1.47
TMEM53-207ENST00000468117 DDX60LQ5H9U9 1706 aaKnown RBP24.21■■□□□ 1.47
TMEM53-207ENST00000468117 ECM29Q5VYK3 1845 aa24.21■■□□□ 1.47
TMEM53-207ENST00000468117 IFIT3O14879 490 aaKnown RBP24.2■■□□□ 1.47
TMEM53-207ENST00000468117 FGRP09769 529 aa24.2■■□□□ 1.47
TMEM53-207ENST00000468117 TMEM67Q5HYA8 995 aa24.2■■□□□ 1.47
TMEM53-207ENST00000468117 C12orf60Q5U649 245 aa24.2■■□□□ 1.47
TMEM53-207ENST00000468117 ESR2Q92731 530 aa24.2■■□□□ 1.47
TMEM53-207ENST00000468117 TEKT1Q969V4 418 aa24.2■■□□□ 1.47
TMEM53-207ENST00000468117 LY9Q9HBG7 655 aa24.2■■□□□ 1.47
TMEM53-207ENST00000468117 SAP30BPQ9UHR5 308 aaKnown RBP24.2■■□□□ 1.47
TMEM53-207ENST00000468117 BRD1O95696 1058 aa24.2■■□□□ 1.46
TMEM53-207ENST00000468117 SYT1P21579 422 aa24.2■■□□□ 1.46
TMEM53-207ENST00000468117 HHIPL2Q6UWX4 724 aa24.2■■□□□ 1.46
TMEM53-207ENST00000468117 RAB11FIP4Q86YS3 637 aa24.2■■□□□ 1.46
TMEM53-207ENST00000468117 FLT1P17948 1338 aa24.19■■□□□ 1.46
TMEM53-207ENST00000468117 GOLGA8BA8MQT2 603 aa24.19■■□□□ 1.46
TMEM53-207ENST00000468117 JAK2O60674 1132 aa24.19■■□□□ 1.46
TMEM53-207ENST00000468117 PCP11498 1178 aaKnown RBP24.19■■□□□ 1.46
TMEM53-207ENST00000468117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.19■■□□□ 1.46
TMEM53-207ENST00000468117 RANBP6O60518 1105 aaKnown RBP24.18■■□□□ 1.46
TMEM53-207ENST00000468117 SLC3A2P08195 630 aaKnown RBP24.18■■□□□ 1.46
TMEM53-207ENST00000468117 CRKP46108 304 aa24.18■■□□□ 1.46
TMEM53-207ENST00000468117 HPS5Q9UPZ3 1129 aa24.18■■□□□ 1.46
TMEM53-207ENST00000468117 SRCAPQ6ZRS2 3230 aa24.18■■□□□ 1.46
TMEM53-207ENST00000468117 MCM4P33991 863 aa24.18■■□□□ 1.46
TMEM53-207ENST00000468117 AMOTL1Q8IY63 956 aa24.18■■□□□ 1.46
TMEM53-207ENST00000468117 BCS1LQ9Y276 419 aa24.18■■□□□ 1.46
TMEM53-207ENST00000468117 POLR3DP05423 398 aaPredicted RBP24.17■■□□□ 1.46
TMEM53-207ENST00000468117 LIFRP42702 1097 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 SART3Q15020 963 aaKnown RBP24.17■■□□□ 1.46
TMEM53-207ENST00000468117 APOBEC3HQ6NTF7 200 aaKnown RBP24.17■■□□□ 1.46
TMEM53-207ENST00000468117 STX6O43752 255 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 CTDNEP1O95476 244 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 PLCD1P51178 756 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 PDE4BQ07343 736 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 NFXL1Q6ZNB6 911 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 SGMS1Q86VZ5 419 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 DYNLL2Q96FJ2 89 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms