RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 HOMER1Q86YM7 354 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 CDHR2Q9BYE9 1310 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 GOLGA6L9A6NEM1 432 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 EFCAB8A8MWE9 144 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 SERPINC1P01008 464 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 PNMA6AP0CW24 399 aaPredicted RBP16.69■□□□□ 0.26
SEC16A-208ENST00000467838 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
SEC16A-208ENST00000467838 CDC27P30260 824 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 MDM2Q00987 491 aaPredicted RBP16.69■□□□□ 0.26
SEC16A-208ENST00000467838 HSP90AB3PQ58FF7 597 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 NT5DC1Q5TFE4 455 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 PI16Q6UXB8 463 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 NKX2-3Q8TAU0 364 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 MPHOSPH8Q99549 860 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.69■□□□□ 0.26
SEC16A-208ENST00000467838 RIPOR2Q9Y4F9 1068 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 UBN2Q6ZU65 1347 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 VWA3AA6NCI4 1184 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 ATP8B1O43520 1251 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
SEC16A-208ENST00000467838 TPM1P09493 284 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 ZNF18P17022 549 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-208ENST00000467838 ALX1Q15699 326 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 CCDC102BQ68D86 513 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-208ENST00000467838 FAM217BQ9NTX9 383 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-208ENST00000467838 ARGLU1Q9NWB6 273 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-208ENST00000467838 BMP6P22004 513 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 FOXP4Q8IVH2 680 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-208ENST00000467838 VGLL2Q8N8G2 317 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 ZCRB1Q8TBF4 217 aaKnown RBP16.68■□□□□ 0.26
SEC16A-208ENST00000467838 CARD10Q9BWT7 1032 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 LY9Q9HBG7 655 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
SEC16A-208ENST00000467838 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 TMEM232C9JQI7 657 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 ZBTB43O43298 467 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 LIFRP42702 1097 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 IFIT5Q13325 482 aaKnown RBP16.67■□□□□ 0.26
SEC16A-208ENST00000467838 LONRF3Q496Y0 759 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
SEC16A-208ENST00000467838 UBXN4Q92575 508 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
SEC16A-208ENST00000467838 FANCLQ9NW38 375 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 PPP2R2CQ9Y2T4 447 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 PCDHA5Q9Y5H7 936 aa16.67■□□□□ 0.26
SEC16A-208ENST00000467838 ADAMTS2O95450 1211 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 PLA2G4AP47712 749 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 PDE4BQ07343 736 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 ISM2Q6H9L7 571 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 KRI1Q8N9T8 703 aaKnown RBP16.66■□□□□ 0.26
SEC16A-208ENST00000467838 CNNM3Q8NE01 707 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
SEC16A-208ENST00000467838 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 UBXN6Q9BZV1 441 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 TCRBV5S4A2TA0A5A2 114 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 STX10O60499 249 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
SEC16A-208ENST00000467838 IARSP41252 1262 aaKnown RBP16.66■□□□□ 0.26
SEC16A-208ENST00000467838 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 PHKBQ93100 1093 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 UTP14AQ9BVJ6 771 aaKnown RBP16.66■□□□□ 0.26
SEC16A-208ENST00000467838 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 ST7Q9NRC1 585 aa16.66■□□□□ 0.26
SEC16A-208ENST00000467838 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 GOLGA8AA7E2F4 631 aa16.65■□□□□ 0.26
SEC16A-208ENST00000467838 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 SARSP49591 514 aaKnown RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 TRIM29Q14134 588 aa16.65■□□□□ 0.26
SEC16A-208ENST00000467838 TAF7LQ5H9L4 462 aa16.65■□□□□ 0.26
SEC16A-208ENST00000467838 MICU3Q86XE3 530 aa16.65■□□□□ 0.26
SEC16A-208ENST00000467838 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
SEC16A-208ENST00000467838 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
SEC16A-208ENST00000467838 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
SEC16A-208ENST00000467838 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 HOOK1Q9UJC3 728 aaKnown RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
SEC16A-208ENST00000467838 B4E1Z4 1266 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 IFNAR1P17181 557 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 PTPREP23469 700 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 GNL2Q13823 731 aaKnown RBP16.64■□□□□ 0.25
SEC16A-208ENST00000467838 SLC9C2Q5TAH2 1124 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 TMCO3Q6UWJ1 677 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
SEC16A-208ENST00000467838 MLKLQ8NB16 471 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 WASF1Q92558 559 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 MAN1B1Q9UKM7 699 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 NPHP1O15259 732 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 PDE6AP16499 860 aa16.64■□□□□ 0.25
SEC16A-208ENST00000467838 CYP2C19P33261 490 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms