RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 OXCT2Q9BYC2 517 aaPredicted RBP6.54□□□□□ -1.36
TRIM27-204ENST00000467742 LGR6Q9HBX8 967 aa6.54□□□□□ -1.36
TRIM27-204ENST00000467742 GDF2Q9UK05 429 aaPredicted RBP6.54□□□□□ -1.36
TRIM27-204ENST00000467742 PCDHGC4Q9Y5F7 938 aa6.54□□□□□ -1.36
TRIM27-204ENST00000467742 AFDNP55196 1824 aaKnown RBP6.54□□□□□ -1.36
TRIM27-204ENST00000467742 A0A1W2PNR3 127 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 EML1O00423 815 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 FAM157BP0CG42 384 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 BAG6P46379 1132 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 MARSP56192 900 aaKnown RBP6.53□□□□□ -1.36
TRIM27-204ENST00000467742 FKBP5Q13451 457 aaPredicted RBP6.53□□□□□ -1.36
TRIM27-204ENST00000467742 PLEKHO1Q53GL0 409 aaPredicted RBP6.53□□□□□ -1.36
TRIM27-204ENST00000467742 ARSJQ5FYB0 599 aaPredicted RBP6.53□□□□□ -1.36
TRIM27-204ENST00000467742 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 C1orf53Q5VUE5 145 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 GOLGA6L1Q8N7Z2 621 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 PIGBQ92521 554 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 ZIC5Q96T25 663 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 ZCCHC2Q9C0B9 1178 aaKnown RBP6.53□□□□□ -1.36
TRIM27-204ENST00000467742 ARFGEF2Q9Y6D5 1785 aa6.53□□□□□ -1.36
TRIM27-204ENST00000467742 CACNA1SQ13698 1873 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 ATXN7O15265 892 aaPredicted RBP6.52□□□□□ -1.37
TRIM27-204ENST00000467742 RNMTO43148 476 aaKnown RBP6.52□□□□□ -1.37
TRIM27-204ENST00000467742 ANP32CO43423 234 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 OIP5O43482 229 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 LGR5O75473 907 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 BMP4P12644 408 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 TXLNAP40222 546 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 GSK3AP49840 483 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 DCTN1Q14203 1278 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 HIF1AQ16665 826 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 TXNRD1Q16881 649 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 ZNF827Q17R98 1081 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 AMOTQ4VCS5 1084 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 PHLDB3Q6NSJ2 640 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 MCM10Q7L590 875 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 AMIGO3Q86WK7 504 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 IL17REQ8NFR9 667 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 KLRG1Q96E93 195 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 DCAF5Q96JK2 942 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 THUMPD2Q9BTF0 503 aaKnown RBP6.52□□□□□ -1.37
TRIM27-204ENST00000467742 ASAP1Q9ULH1 1129 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 NUDCQ9Y266 331 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 NUP98P52948 1817 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 KIF13BQ9NQT8 1826 aa6.52□□□□□ -1.37
TRIM27-204ENST00000467742 N4BP2Q86UW6 1770 aaPredicted RBP6.52□□□□□ -1.37
TRIM27-204ENST00000467742 COL11A2P13942 1736 aaPredicted RBP6.51□□□□□ -1.37
TRIM27-204ENST00000467742 PLSCR1O15162 318 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 SF3B2Q13435 895 aaKnown RBP6.51□□□□□ -1.37
TRIM27-204ENST00000467742 NFE2L2Q16236 605 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 C1orf141Q5JVX7 400 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 KANK3Q6NY19 840 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 SLCO4C1Q6ZQN7 724 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 PNISRQ8TF01 805 aaKnown RBP6.51□□□□□ -1.37
TRIM27-204ENST00000467742 MYO19Q96H55 970 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 PDGFDQ9GZP0 370 aaPredicted RBP6.51□□□□□ -1.37
TRIM27-204ENST00000467742 MRS2Q9HD23 443 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 ATG3Q9NT62 314 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 TMOD3Q9NYL9 352 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 GNEQ9Y223 722 aaKnown RBP6.51□□□□□ -1.37
TRIM27-204ENST00000467742 RRP7AQ9Y3A4 280 aaKnown RBP6.51□□□□□ -1.37
TRIM27-204ENST00000467742 GJA3Q9Y6H8 435 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 DLEC1Q9Y238 1755 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 BRCA1P38398 1863 aaKnown RBP6.51□□□□□ -1.37
TRIM27-204ENST00000467742 ANKRD31Q8N7Z5 1873 aa6.51□□□□□ -1.37
TRIM27-204ENST00000467742 NRXN2Q9P2S2 1712 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 LAMB2P55268 1798 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 ERVV-2B6SEH9 535 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 ARAFP10398 606 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 MAPTP10636 758 aaKnown RBP6.5□□□□□ -1.37
TRIM27-204ENST00000467742 TNP2Q05952 138 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 SLC39A6Q13433 755 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 ITPK1Q13572 414 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 LAMC2Q13753 1193 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 WDR43Q15061 677 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRIM27-204ENST00000467742 RTN1Q16799 776 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 BICDL1Q6ZP65 573 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 SMIM5Q71RC9 77 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 ALDH16A1Q8IZ83 802 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 LINC00116Q8NCU8 138 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 NEDD1Q8NHV4 660 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 SLC52A2Q9HAB3 445 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 AVENQ9NQS1 362 aaPredicted RBP6.5□□□□□ -1.37
TRIM27-204ENST00000467742 PARP3Q9Y6F1 533 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 MAPK8IP3Q9UPT6 1336 aa6.5□□□□□ -1.37
TRIM27-204ENST00000467742 DCDC2BA2VCK2 349 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 PHF20L1A8MW92 1017 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 C2CD2LO14523 706 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 EFSO43281 561 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 KCNQ3O43525 872 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 HSP90AB1P08238 724 aaKnown RBP6.49□□□□□ -1.37
TRIM27-204ENST00000467742 TMPOP42166 694 aaKnown RBP6.49□□□□□ -1.37
TRIM27-204ENST00000467742 RASSF7Q02833 373 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 DIEXFQ68CQ4 756 aaKnown RBP6.49□□□□□ -1.37
TRIM27-204ENST00000467742 C16orf46Q6P387 395 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 PODNQ7Z5L7 613 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 PHACTR1Q9C0D0 580 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 ANKIB1Q9P2G1 1089 aa6.49□□□□□ -1.37
TRIM27-204ENST00000467742 EGFL7Q9UHF1 273 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms