RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ASPAP45381 313 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
VPS50-209ENST00000467326 MEI1Q5TIA1 1274 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 PAOXQ6QHF9 649 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 GPBAR1Q8TDU6 330 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 GIPC2Q8TF65 315 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
VPS50-209ENST00000467326 ATXN3LQ9H3M9 355 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 GSX1Q9H4S2 264 aaPredicted RBP6.58□□□□□ -1.36
VPS50-209ENST00000467326 PIDD1Q9HB75 910 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 VTI1BQ9UEU0 232 aa6.58□□□□□ -1.36
VPS50-209ENST00000467326 KIAA1324LA8MWY0 1029 aaPredicted RBP6.57□□□□□ -1.36
VPS50-209ENST00000467326 SORBS3O60504 671 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 TRIM37O94972 964 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 BMP6P22004 513 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 LRRC14Q15048 493 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 RASIP1Q5U651 963 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 GRIN3AQ8TCU5 1115 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 MFSD14AQ96MC6 490 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 KRTAP4-2Q9BYR5 136 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 SEMA6CQ9H3T2 930 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 ACSS3Q9H6R3 686 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 CRIM1Q9NZV1 1036 aa6.57□□□□□ -1.36
VPS50-209ENST00000467326 ST13P50502 369 aaKnown RBP6.56□□□□□ -1.36
VPS50-209ENST00000467326 MAP7Q14244 749 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 NFKBIBQ15653 356 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 TTBK2Q6IQ55 1244 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 MPRIPQ6WCQ1 1025 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 FANCD2OSQ96PS1 177 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 BCL11AQ9H165 835 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 CACNA2D2Q9NY47 1150 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 DAGLAQ9Y4D2 1042 aa6.56□□□□□ -1.36
VPS50-209ENST00000467326 NFICP08651 508 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 CTSHP09668 335 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 ZNF326Q5BKZ1 582 aaKnown RBP6.55□□□□□ -1.36
VPS50-209ENST00000467326 ZC3H12AQ5D1E8 599 aaKnown RBP6.55□□□□□ -1.36
VPS50-209ENST00000467326 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 ZDHHC13Q8IUH4 622 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 SHKBP1Q8TBC3 707 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 GAL3ST3Q96A11 431 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 PRKAG2Q9UGJ0 569 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 CYP8B1Q9UNU6 501 aa6.55□□□□□ -1.36
VPS50-209ENST00000467326 OAS3Q9Y6K5 1087 aaKnown RBP6.55□□□□□ -1.36
VPS50-209ENST00000467326 TGFB1P01137 390 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 HCLS1P14317 486 aaPredicted RBP6.54□□□□□ -1.36
VPS50-209ENST00000467326 LIG3P49916 1009 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 TRIM26Q12899 539 aaPredicted RBP6.54□□□□□ -1.36
VPS50-209ENST00000467326 TTLL4Q14679 1199 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 TAF1CQ15572 869 aaPredicted RBP6.54□□□□□ -1.36
VPS50-209ENST00000467326 FBXL6Q8N531 539 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 GIMAP7Q8NHV1 300 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 TBC1D32Q96NH3 1257 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
VPS50-209ENST00000467326 LMNB1P20700 586 aa6.53□□□□□ -1.36
VPS50-209ENST00000467326 RPS26P62854 115 aaKnown RBP6.53□□□□□ -1.36
VPS50-209ENST00000467326 ERVK-24P63145 666 aa6.53□□□□□ -1.36
VPS50-209ENST00000467326 MAP3K11Q16584 847 aa6.53□□□□□ -1.36
VPS50-209ENST00000467326 NOC4LQ9BVI4 516 aaKnown RBP6.53□□□□□ -1.36
VPS50-209ENST00000467326 DCDC2CA8MYV0 355 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 DYNC1LI2O43237 492 aaPredicted RBP6.52□□□□□ -1.37
VPS50-209ENST00000467326 NEFMP07197 916 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 RLBP1P12271 317 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 ZAR1Q86SH2 424 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 SMYD4Q8IYR2 804 aaPredicted RBP6.52□□□□□ -1.37
VPS50-209ENST00000467326 ELMO3Q96BJ8 720 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 PICK1Q9NRD5 415 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 ATG3Q9NT62 314 aa6.52□□□□□ -1.37
VPS50-209ENST00000467326 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
VPS50-209ENST00000467326 WNT11O96014 354 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 F13BP05160 661 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 ADMP35318 185 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 CPSF6Q16630 551 aaKnown RBP eCLIP6.51□□□□□ -1.37
VPS50-209ENST00000467326 AGMOQ6ZNB7 445 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 RNF214Q8ND24 703 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 GATA6Q92908 595 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 ISL2Q96A47 359 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 METTL22Q9BUU2 404 aaPredicted RBP6.51□□□□□ -1.37
VPS50-209ENST00000467326 OSBPL1AQ9BXW6 950 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 USP31Q70CQ4 1352 aa6.51□□□□□ -1.37
VPS50-209ENST00000467326 PRR19A6NJB7 356 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 ZNF16P17020 682 aaPredicted RBP6.5□□□□□ -1.37
VPS50-209ENST00000467326 PTPN11Q06124 597 aaPredicted RBP6.5□□□□□ -1.37
VPS50-209ENST00000467326 SEPT6Q14141 434 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 MRPL58Q14197 206 aaKnown RBP6.5□□□□□ -1.37
VPS50-209ENST00000467326 PPM1JQ5JR12 505 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 WIPI1Q5MNZ9 446 aaPredicted RBP6.5□□□□□ -1.37
VPS50-209ENST00000467326 LRFN4Q6PJG9 635 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 MIR1-1HGQ9H1L0 117 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 PCDHB5Q9Y5E4 795 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 CSADQ9Y600 493 aa6.5□□□□□ -1.37
VPS50-209ENST00000467326 PRAMEF27A3QJZ7 478 aa6.49□□□□□ -1.37
VPS50-209ENST00000467326 FAM170BA6NMN3 283 aa6.49□□□□□ -1.37
VPS50-209ENST00000467326 TFE3P19532 575 aaPredicted RBP6.49□□□□□ -1.37
VPS50-209ENST00000467326 NTF4P34130 210 aa6.49□□□□□ -1.37
VPS50-209ENST00000467326 CDK5R2Q13319 367 aa6.49□□□□□ -1.37
VPS50-209ENST00000467326 ZBTB37Q5TC79 503 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms