RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SMARCC1Q92922 1105 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-207ENST00000467273 KIAA1551Q9HCM1 1747 aa7.71□□□□□ -1.18
PTCD3-207ENST00000467273 ARFGEF1Q9Y6D6 1849 aa7.71□□□□□ -1.18
PTCD3-207ENST00000467273 PALLDQ8WX93 1383 aa7.71□□□□□ -1.18
PTCD3-207ENST00000467273 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 KRTAP4-8A0A0G2JLE6 195 aa7.7□□□□□ -1.18
PTCD3-207ENST00000467273 PALM3A6NDB9 673 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 BACH1O14867 736 aa7.7□□□□□ -1.18
PTCD3-207ENST00000467273 HSPA1AP0DMV8 641 aaKnown RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 HSPA1BP0DMV9 641 aaKnown RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 MCTP1Q6DN14 999 aa7.7□□□□□ -1.18
PTCD3-207ENST00000467273 C20orf204Q6ZNR8 217 aa7.7□□□□□ -1.18
PTCD3-207ENST00000467273 RHPN1Q8TCX5 695 aa7.7□□□□□ -1.18
PTCD3-207ENST00000467273 LENG1Q96BZ8 264 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 JPH1Q9HDC5 661 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 SCHIP1Q9P0W5 487 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 TFIP11Q9UBB9 837 aaKnown RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 BRCA1P38398 1863 aaKnown RBP7.7□□□□□ -1.18
PTCD3-207ENST00000467273 EDC4Q6P2E9 1401 aaKnown RBP7.69□□□□□ -1.18
PTCD3-207ENST00000467273 LMOD1P29536 600 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-207ENST00000467273 TBCELQ5QJ74 424 aa7.69□□□□□ -1.18
PTCD3-207ENST00000467273 PBXIP1Q96AQ6 731 aa7.69□□□□□ -1.18
PTCD3-207ENST00000467273 TRAIPQ9BWF2 469 aa7.69□□□□□ -1.18
PTCD3-207ENST00000467273 IGFLR1Q9H665 355 aa7.69□□□□□ -1.18
PTCD3-207ENST00000467273 SBNO2Q9Y2G9 1366 aa7.69□□□□□ -1.18
PTCD3-207ENST00000467273 EML1O00423 815 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 NOS2P35228 1153 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 HTRA3P83110 453 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 ARHGAP27Q6ZUM4 889 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 NUDT8Q8WV74 236 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 BHMTQ93088 406 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 CEP63Q96MT8 703 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 UBE2OQ9C0C9 1292 aaKnown RBP7.68□□□□□ -1.18
PTCD3-207ENST00000467273 BRD7Q9NPI1 651 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 BCS1LQ9Y276 419 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 PCDH11XQ9BZA7 1347 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 PCDH11YQ9BZA8 1340 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 N4BP2Q86UW6 1770 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-207ENST00000467273 RTL1A6NKG5 1358 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 MEGF6O75095 1541 aa7.68□□□□□ -1.18
PTCD3-207ENST00000467273 EIF5BO60841 1220 aaKnown RBP7.67□□□□□ -1.18
PTCD3-207ENST00000467273 TEAD4Q15561 434 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 C9orf131Q5VYM1 1079 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 HDGFL2Q7Z4V5 671 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-207ENST00000467273 NME9Q86XW9 330 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 SLC9A9Q8IVB4 645 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTCD3-207ENST00000467273 NLGN1Q8N2Q7 840 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTCD3-207ENST00000467273 HSH2DQ96JZ2 352 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 PRDM10Q9NQV6 1147 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 PCDHGA11Q9Y5H2 935 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 CD163L1Q9NR16 1453 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 KCPQ6ZWJ8 1503 aa7.67□□□□□ -1.18
PTCD3-207ENST00000467273 MAP2P11137 1827 aaKnown RBP7.66□□□□□ -1.18
PTCD3-207ENST00000467273 MMP10P09238 476 aa7.66□□□□□ -1.18
PTCD3-207ENST00000467273 SH3PXD2AQ5TCZ1 1133 aa7.66□□□□□ -1.18
PTCD3-207ENST00000467273 RAPGEF4Q8WZA2 1011 aa7.66□□□□□ -1.18
PTCD3-207ENST00000467273 CCDC87Q9NVE4 849 aa7.66□□□□□ -1.18
PTCD3-207ENST00000467273 ZNF358Q9NW07 568 aa7.66□□□□□ -1.18
PTCD3-207ENST00000467273 GPC6Q9Y625 555 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-207ENST00000467273 ZNF831Q5JPB2 1677 aa7.66□□□□□ -1.18
PTCD3-207ENST00000467273 ITGB4P16144 1822 aa7.66□□□□□ -1.18
PTCD3-207ENST00000467273 PIK3CDO00329 1044 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 C4AP0C0L4 1744 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 VEGFAP15692 232 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-207ENST00000467273 HOXC9P31274 260 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 CDCA8Q53HL2 280 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 MAP3K19Q56UN5 1328 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 SMG6Q86US8 1419 aaKnown RBP7.65□□□□□ -1.18
PTCD3-207ENST00000467273 AMIGO3Q86WK7 504 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 TERF2IPQ9NYB0 399 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 SLC6A14Q9UN76 642 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 KCNH4Q9UQ05 1017 aa7.65□□□□□ -1.18
PTCD3-207ENST00000467273 MAFBQ9Y5Q3 323 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-207ENST00000467273 SBF1O95248 1867 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 RGPD2P0DJD1 1756 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 LOC102724428A0A0B4J2F2 783 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 A0A0G2JLW4 131 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 SERTM1A2A2V5 107 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 PAX4O43316 350 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 SIK1P57059 783 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 GTF2IP78347 998 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 TMF1P82094 1093 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 EML3Q32P44 896 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 MPRIPQ6WCQ1 1025 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 DMRTC2Q8IXT2 367 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-207ENST00000467273 FMR1NBQ8N0W7 255 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-207ENST00000467273 PUS7Q96PZ0 661 aaKnown RBP7.64□□□□□ -1.19
PTCD3-207ENST00000467273 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-207ENST00000467273 PCMTD2Q9NV79 361 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 RNF181Q9P0P0 153 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 PIM2Q9P1W9 311 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 RNF112Q9ULX5 631 aa7.64□□□□□ -1.19
PTCD3-207ENST00000467273 KDM6AO15550 1401 aaPredicted RBP7.63□□□□□ -1.19
PTCD3-207ENST00000467273 KIF24Q5T7B8 1368 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 SFI1A8K8P3 1242 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 ATP9BO43861 1147 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 COBLO75128 1261 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 DPEP1P16444 411 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms