RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PUM3Q15397 648 aaKnown RBP7.16□□□□□ -1.26
CXXC4-202ENST00000466963 PI4KAP1Q8N8J0 262 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 NUDT12Q9BQG2 462 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 COL25A1Q9BXS0 654 aaPredicted RBP7.16□□□□□ -1.26
CXXC4-202ENST00000466963 UNC93B1Q9H1C4 597 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 DHX36Q9H2U1 1008 aaKnown RBP7.16□□□□□ -1.26
CXXC4-202ENST00000466963 ALPK3Q96L96 1907 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 DNM1LO00429 736 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 SNX17Q15036 470 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 MFSD14CQ5VZR4 134 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 ATF7IPQ6VMQ6 1270 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 PHIPQ8WWQ0 1821 aa7.15□□□□□ -1.26
CXXC4-202ENST00000466963 FLT3LGP49771 235 aa7.15□□□□□ -1.26
CXXC4-202ENST00000466963 FOXO4P98177 505 aa7.15□□□□□ -1.26
CXXC4-202ENST00000466963 PRKCZQ05513 592 aa7.15□□□□□ -1.26
CXXC4-202ENST00000466963 MKRN3Q13064 507 aaKnown RBP7.15□□□□□ -1.26
CXXC4-202ENST00000466963 FAM43BQ6ZT52 329 aaPredicted RBP7.15□□□□□ -1.26
CXXC4-202ENST00000466963 ABRAQ8N0Z2 381 aa7.15□□□□□ -1.26
CXXC4-202ENST00000466963 MSL3Q8N5Y2 521 aaKnown RBP7.15□□□□□ -1.26
CXXC4-202ENST00000466963 FAM84BQ96KN1 310 aaPredicted RBP7.15□□□□□ -1.26
CXXC4-202ENST00000466963 APBA2Q99767 749 aa7.15□□□□□ -1.26
CXXC4-202ENST00000466963 FRMPD3Q5JV73 1810 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 SLC15A5A6NIM6 579 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 GRM8O00222 908 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 OLFML2BQ68BL8 750 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 DLK2Q6UY11 383 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 UBE3BQ7Z3V4 1068 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 SHCBP1Q8NEM2 672 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 LPIN2Q92539 896 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 MTIF3Q9H2K0 278 aaKnown RBP7.15□□□□□ -1.27
CXXC4-202ENST00000466963 TDRD3Q9H7E2 651 aaKnown RBP7.15□□□□□ -1.27
CXXC4-202ENST00000466963 LRRFIP2Q9Y608 721 aaKnown RBP7.15□□□□□ -1.27
CXXC4-202ENST00000466963 LTBP2Q14767 1821 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 PTPRCP08575 1304 aa7.15□□□□□ -1.27
CXXC4-202ENST00000466963 ANXA1P04083 346 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 ZKSCAN1P17029 563 aaPredicted RBP7.14□□□□□ -1.27
CXXC4-202ENST00000466963 MAGEA10P43363 369 aaPredicted RBP7.14□□□□□ -1.27
CXXC4-202ENST00000466963 SMCR8Q8TEV9 937 aaPredicted RBP7.14□□□□□ -1.27
CXXC4-202ENST00000466963 FAM122AQ96E09 287 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 CLRN2A0PK11 232 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 FLIIQ13045 1269 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 MTFR1Q15390 333 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 APOBEC3HQ6NTF7 200 aaKnown RBP7.14□□□□□ -1.27
CXXC4-202ENST00000466963 C12orf42Q96LP6 360 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 TSEN34Q9BSV6 310 aaKnown RBP7.14□□□□□ -1.27
CXXC4-202ENST00000466963 MROH7Q68CQ1 1323 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 WTIPA6NIX2 430 aaPredicted RBP7.14□□□□□ -1.27
CXXC4-202ENST00000466963 STRNO43815 780 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 PDE8BO95263 885 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 PTPRAP18433 802 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 USP14P54578 494 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 PRAMEF18Q5VWM3 479 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 LPAR1Q92633 364 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 USP6NLQ92738 828 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 DEFB118Q96PH6 123 aa7.14□□□□□ -1.27
CXXC4-202ENST00000466963 CT47B1P0C2W7 299 aaPredicted RBP7.13□□□□□ -1.27
CXXC4-202ENST00000466963 METTL16Q86W50 562 aaKnown RBP7.13□□□□□ -1.27
CXXC4-202ENST00000466963 PAWRQ96IZ0 340 aaKnown RBP7.13□□□□□ -1.27
CXXC4-202ENST00000466963 CPA4Q9UI42 421 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 TNRC18O15417 2968 aaPredicted RBP7.13□□□□□ -1.27
CXXC4-202ENST00000466963 PRKG1Q13976 671 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 RAB30Q15771 203 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 TWISTNBQ3B726 338 aaPredicted RBP7.13□□□□□ -1.27
CXXC4-202ENST00000466963 TXNRD3Q86VQ6 643 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 MB21D1Q8N884 522 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 TOX2Q96NM4 488 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 PHAXQ9H814 394 aaKnown RBP7.13□□□□□ -1.27
CXXC4-202ENST00000466963 TMOD4Q9NZQ9 345 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 GJD2Q9UKL4 321 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 RABGAP1Q9Y3P9 1069 aa7.13□□□□□ -1.27
CXXC4-202ENST00000466963 USP17L5A8MUK1 530 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 TCP10L2B9ZVM9 353 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 FGFR2P21802 821 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 BCAMP50895 628 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 BEND3Q5T5X7 828 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
CXXC4-202ENST00000466963 C7orf61Q8IZ16 206 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 GPRC5AQ8NFJ5 357 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 MAFAQ8NHW3 353 aaPredicted RBP7.12□□□□□ -1.27
CXXC4-202ENST00000466963 TMEM39BQ9GZU3 492 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 PHF20L1A8MW92 1017 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 ASNSP08243 561 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 POU3F3P20264 500 aaPredicted RBP7.12□□□□□ -1.27
CXXC4-202ENST00000466963 ZNF280CQ8ND82 737 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 STAP2Q9UGK3 403 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 DIS3Q9Y2L1 958 aaKnown RBP7.12□□□□□ -1.27
CXXC4-202ENST00000466963 LDHBP07195 334 aaKnown RBP7.12□□□□□ -1.27
CXXC4-202ENST00000466963 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.12□□□□□ -1.27
CXXC4-202ENST00000466963 MAF1Q9H063 256 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
CXXC4-202ENST00000466963 SOX1O00570 391 aaPredicted RBP7.11□□□□□ -1.27
CXXC4-202ENST00000466963 ZEB1P37275 1124 aaPredicted RBP7.11□□□□□ -1.27
CXXC4-202ENST00000466963 MORN1Q5T089 497 aa7.11□□□□□ -1.27
CXXC4-202ENST00000466963 USP17L2Q6R6M4 530 aa7.11□□□□□ -1.27
CXXC4-202ENST00000466963 IL27Q8NEV9 243 aa7.11□□□□□ -1.27
CXXC4-202ENST00000466963 ARHGAP39Q9C0H5 1083 aa7.11□□□□□ -1.27
CXXC4-202ENST00000466963 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
CXXC4-202ENST00000466963 PLXNB2O15031 1838 aa7.11□□□□□ -1.27
CXXC4-202ENST00000466963 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.11□□□□□ -1.27
CXXC4-202ENST00000466963 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms