RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	EDC3	Q96F86	508 aa	Known RBP	11.51	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DNAJC2	Q99543	621 aa	Known RBP	11.51	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZNF112	Q9UJU3	913 aa		11.51	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ANGEL1	Q9UNK9	670 aa	Known RBP	11.51	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	GLRX3	O76003	335 aa	Known RBP	11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	MX1	P20591	662 aa		11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	CYP7A1	P22680	504 aa		11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	IREB2	P48200	963 aa	Known RBP	11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZNF157	P51786	506 aa	Predicted RBP	11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	NUCB1	Q02818	461 aa		11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	TCP10	Q12799	353 aa		11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	RIOK1	Q9BRS2	568 aa	Known RBP	11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	WBP1L	Q9NX94	342 aa		11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	AK9	Q5TCS8	1911 aa		11.5	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DDX60L	Q5H9U9	1706 aa	Known RBP	11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	SIPA1L1	O43166	1804 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ERC2	O15083	957 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	TBC1D12	O60347	775 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	AOC2	O75106	756 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ADD2	P35612	726 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	IRX6	P78412	446 aa	Predicted RBP	11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	TTLL12	Q14166	644 aa	Predicted RBP	11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	UBE3C	Q15386	1083 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	SLC9C2	Q5TAH2	1124 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DCAF15	Q66K64	600 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	TEX11	Q8IYF3	940 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	REM2	Q8IYK8	340 aa	Predicted RBP	11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ANKRD13A	Q8IZ07	590 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	NOL10	Q9BSC4	688 aa	Known RBP	11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	FZD1	Q9UP38	647 aa		11.49	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DDTL	A6NHG4	134 aa	Predicted RBP	11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	PDE1A	P54750	535 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DYNLL1	P63167	89 aa	Known RBP	11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	MAP3K9	P80192	1104 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	MAP2K1	Q02750	393 aa	Predicted RBP	11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	PRKG1	Q13976	671 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	TSHZ3	Q63HK5	1081 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	METTL16	Q86W50	562 aa	Known RBP	11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	CHD1L	Q86WJ1	897 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	TICAM2	Q86XR7	235 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	KBTBD3	Q8NAB2	608 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	CLMN	Q96JQ2	1002 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZIC5	Q96T25	663 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZNF341	Q9BYN7	854 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	FLT1	P17948	1338 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZNF532	Q9HCE3	1301 aa		11.48	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	MYH1	P12882	1939 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	PHF20L1	A8MW92	1017 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZBTB48	P10074	688 aa	Predicted RBP	11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	PICALM	Q13492	652 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	NOL9	Q5SY16	702 aa	Known RBP	11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	SPRYD7	Q5W111	196 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	MIGA1	Q8NAN2	632 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	WNK4	Q96J92	1243 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	CSRNP1	Q96S65	589 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	BCL11A	Q9H165	835 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	DHX36	Q9H2U1	1008 aa	Known RBP	11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	OSBPL3	Q9H4L5	887 aa		11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.47	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	MAGEB6P1	A0A0J9YX57	407 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	HSPA1A	P0DMV8	641 aa	Known RBP	11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	HSPA1B	P0DMV9	641 aa	Known RBP	11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	GJA5	P36382	358 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	KIF23	Q02241	960 aa	Predicted RBP	11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	VGLL4	Q14135	290 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	ZSCAN25	Q6NSZ9	544 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	TGFBRAP1	Q8WUH2	860 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	SLC10A4	Q96EP9	437 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	WRNIP1	Q96S55	665 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	LNPK	Q9C0E8	428 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	SNCAIP	Q9Y6H5	919 aa		11.46	□□□□□ -0.57
SDCCAG3-208	ENST00000466579	NAV1	Q8NEY1	1877 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	TESPA1	A2RU30	521 aa	Predicted RBP	11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SPDYE5	A6NIY4	337 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CHGB	P05060	677 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ZFY	P08048	801 aa	Predicted RBP	11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	TM4SF4	P48230	202 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	MIGA2	Q7L4E1	593 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	MAPKAPK5	Q8IW41	473 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PLEKHM2	Q8IWE5	1019 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PI4KB	Q9UBF8	816 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	HERC5	Q9UII4	1024 aa	Known RBP	11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CSAD	Q9Y600	493 aa		11.45	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	DOCK1	Q14185	1865 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PHIP	Q8WWQ0	1821 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	RNF113A	O15541	343 aa	Known RBP	11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CA12	O43570	354 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	INPP5B	P32019	993 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	GRM1	Q13255	1194 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SLFNL1	Q499Z3	407 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	B4GALNT3	Q6L9W6	998 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ERO1B	Q86YB8	467 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.44	□□□□□ -0.58

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