RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 SAP30BPQ9UHR5 308 aaKnown RBP14.57□□□□□ -0.08
SHROOM3-202ENST00000466541 GLRX3O76003 335 aaKnown RBP14.56□□□□□ -0.08
SHROOM3-202ENST00000466541 PDE1AP54750 535 aa14.56□□□□□ -0.08
SHROOM3-202ENST00000466541 PI4K2BQ8TCG2 481 aa14.56□□□□□ -0.08
SHROOM3-202ENST00000466541 SLC10A4Q96EP9 437 aa14.56□□□□□ -0.08
SHROOM3-202ENST00000466541 CLMNQ96JQ2 1002 aa14.56□□□□□ -0.08
SHROOM3-202ENST00000466541 CSRNP1Q96S65 589 aa14.56□□□□□ -0.08
SHROOM3-202ENST00000466541 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
SHROOM3-202ENST00000466541 DDTLA6NHG4 134 aaPredicted RBP14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 ENTPD3O75355 529 aa14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 SLURP2P0DP57 97 aa14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 PPP4CP60510 307 aa14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 SH3BP5LQ7L8J4 393 aa14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 HOOK2Q96ED9 719 aa14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 HHIPL1Q96JK4 782 aa14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 FSD1Q9BTV5 496 aa14.55□□□□□ -0.08
SHROOM3-202ENST00000466541 TCRBV5S4A2TA0A5A2 114 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 TRIM6-TRIM34B2RNG4 842 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 ADD2P35612 726 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 DCAF15Q66K64 600 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 RASAL3Q86YV0 1011 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 ZKSCAN4Q969J2 545 aaPredicted RBP14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 CCDC102AQ96A19 550 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 WRNIP1Q96S55 665 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 ZIC5Q96T25 663 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 OSBPL5Q9H0X9 879 aaPredicted RBP14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 ARMT1Q9H993 441 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 ELP3Q9H9T3 547 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 OTOFQ9HC10 1997 aa14.54□□□□□ -0.08
SHROOM3-202ENST00000466541 MYH1P12882 1939 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 FOCADQ5VW36 1801 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 RFX7Q2KHR2 1363 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 SALL3Q9BXA9 1300 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 FAM196BA6NMK8 535 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 MBD4O95243 580 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 LCORLQ8N3X6 602 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 KBTBD3Q8NAB2 608 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 ZNF341Q9BYN7 854 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 STAP2Q9UGK3 403 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 PALD1Q9ULE6 856 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 CSADQ9Y600 493 aa14.53□□□□□ -0.08
SHROOM3-202ENST00000466541 RPAP1Q9BWH6 1393 aaPredicted RBP14.52□□□□□ -0.08
SHROOM3-202ENST00000466541 FLT1P17948 1338 aa14.52□□□□□ -0.08
SHROOM3-202ENST00000466541 FAM155AB1AL88 458 aaPredicted RBP14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 RNF113AO15541 343 aaKnown RBP14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 IGSF3O75054 1194 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 SLC10A3P09131 477 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 MAP3K9P80192 1104 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 KIF23Q02241 960 aaPredicted RBP14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 LDLRAD1Q5T700 205 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 PLEKHM2Q8IWE5 1019 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 ANKRD13AQ8IZ07 590 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 JMYQ8N9B5 988 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 RILPL2Q969X0 211 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 AIDAQ96BJ3 306 aa14.52□□□□□ -0.09
SHROOM3-202ENST00000466541 PRKAB2O43741 272 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 INPP5BP32019 993 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 NOGQ13253 232 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 VGLL4Q14135 290 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 MAP3K11Q16584 847 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 SDR42E1Q8WUS8 393 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 CCDC136Q96JN2 1154 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 RIOK1Q9BRS2 568 aaKnown RBP14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 TRIM34Q9BYJ4 488 aa14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 CRNKL1Q9BZJ0 848 aaKnown RBP14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 PUS7LQ9H0K6 701 aaKnown RBP14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHROOM3-202ENST00000466541 PDE4AP27815 886 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 MAP2K2P36507 400 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 UBE3CQ15386 1083 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 TMED8Q6PL24 325 aaPredicted RBP14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 CERS3Q8IU89 383 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 CRACR2BQ8N4Y2 399 aaPredicted RBP14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 OPTNQ96CV9 577 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 WNK4Q96J92 1243 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 BEGAINQ9BUH8 593 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 SLC4A4Q9Y6R1 1079 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 BAZ2AQ9UIF9 1905 aaKnown RBP14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 NAV1Q8NEY1 1877 aa14.5□□□□□ -0.09
SHROOM3-202ENST00000466541 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 POLR3DP05423 398 aaPredicted RBP14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 HLA-DOAP06340 250 aa14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 HSPA1AP0DMV8 641 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 HSPA1BP0DMV9 641 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 LRRFIP1Q32MZ4 808 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 SPRYD7Q5W111 196 aa14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 OSBP2Q969R2 916 aa14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 EVI5LQ96CN4 794 aa14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 OTUD5Q96G74 571 aa14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 PI4KBQ9UBF8 816 aa14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 TSKSQ9UJT2 592 aa14.49□□□□□ -0.09
SHROOM3-202ENST00000466541 M0R2C6 588 aa14.48□□□□□ -0.09
SHROOM3-202ENST00000466541 ZFYP08048 801 aaPredicted RBP14.48□□□□□ -0.09
SHROOM3-202ENST00000466541 MAP2K1Q02750 393 aaPredicted RBP14.48□□□□□ -0.09
SHROOM3-202ENST00000466541 SKAP1Q86WV1 359 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms