RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 CENPFP49454 3210 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 TNPO2O14787 897 aaKnown RBP10.65□□□□□ -0.7
DDR1-242ENST00000465966 INHAP05111 366 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 NBPF7P0C2Y1 421 aaPredicted RBP10.65□□□□□ -0.7
DDR1-242ENST00000465966 SLC5A1P13866 664 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 FLT3LGP49771 235 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 MOGSQ13724 837 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 MVPQ14764 893 aaKnown RBP10.65□□□□□ -0.7
DDR1-242ENST00000465966 GPAT2Q6NUI2 795 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 CDC42EP5Q6NZY7 148 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 VGLL2Q8N8G2 317 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 SMCR8Q8TEV9 937 aaPredicted RBP10.65□□□□□ -0.7
DDR1-242ENST00000465966 ARHGAP45Q92619 1136 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 KAZALD1Q96I82 304 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 DEFB118Q96PH6 123 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 USP40Q9NVE5 1235 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 STAP2Q9UGK3 403 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 SLC45A1Q9Y2W3 748 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 ZHX2Q9Y6X8 837 aa10.65□□□□□ -0.7
DDR1-242ENST00000465966 OTOFQ9HC10 1997 aa10.65□□□□□ -0.71
DDR1-242ENST00000465966 UTYO14607 1347 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 IPO8O15397 1037 aaKnown RBP10.64□□□□□ -0.71
DDR1-242ENST00000465966 MS4A1P11836 297 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 IRF5Q13568 498 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 RABL6Q3YEC7 729 aaPredicted RBP10.64□□□□□ -0.71
DDR1-242ENST00000465966 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 NECAB2Q7Z6G3 386 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 SCYL3Q8IZE3 742 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 TMEM57Q8N5G2 664 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 LPIN2Q92539 896 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 COA7Q96BR5 231 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 GNL3LQ9NVN8 582 aaKnown RBP10.64□□□□□ -0.71
DDR1-242ENST00000465966 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 DAGLAQ9Y4D2 1042 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 BRCA2P51587 3418 aa10.64□□□□□ -0.71
DDR1-242ENST00000465966 PTPRCP08575 1304 aa10.63□□□□□ -0.71
DDR1-242ENST00000465966 A0A0G2JLL6 359 aaPredicted RBP10.63□□□□□ -0.71
DDR1-242ENST00000465966 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
DDR1-242ENST00000465966 ELNP15502 786 aa10.63□□□□□ -0.71
DDR1-242ENST00000465966 PTPRAP18433 802 aa10.63□□□□□ -0.71
DDR1-242ENST00000465966 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
DDR1-242ENST00000465966 NFIAQ12857 509 aa10.63□□□□□ -0.71
DDR1-242ENST00000465966 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
DDR1-242ENST00000465966 PRRT2Q7Z6L0 340 aaPredicted RBP10.63□□□□□ -0.71
DDR1-242ENST00000465966 ZSCAN29Q8IWY8 852 aaPredicted RBP10.63□□□□□ -0.71
DDR1-242ENST00000465966 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
DDR1-242ENST00000465966 CCDC136Q96JN2 1154 aa10.63□□□□□ -0.71
DDR1-242ENST00000465966 API5Q9BZZ5 524 aaKnown RBP10.63□□□□□ -0.71
DDR1-242ENST00000465966 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
DDR1-242ENST00000465966 ARAP2Q8WZ64 1704 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 SOX1O00570 391 aaPredicted RBP10.62□□□□□ -0.71
DDR1-242ENST00000465966 FGFR2P21802 821 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 BMP8BP34820 402 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 ANKRD44Q8N8A2 993 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 PAWRQ96IZ0 340 aaKnown RBP10.62□□□□□ -0.71
DDR1-242ENST00000465966 PAK6Q9NQU5 681 aaPredicted RBP10.62□□□□□ -0.71
DDR1-242ENST00000465966 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 PNMA3Q9UL41 463 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 AFG3L2Q9Y4W6 797 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 TRIOBPQ9H2D6 2365 aa10.62□□□□□ -0.71
DDR1-242ENST00000465966 PHF20L1A8MW92 1017 aa10.61□□□□□ -0.71
DDR1-242ENST00000465966 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
DDR1-242ENST00000465966 ENTPD3O75355 529 aa10.61□□□□□ -0.71
DDR1-242ENST00000465966 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
DDR1-242ENST00000465966 ZGPATQ8N5A5 531 aaKnown RBP10.61□□□□□ -0.71
DDR1-242ENST00000465966 ANKRD13CQ8N6S4 541 aa10.61□□□□□ -0.71
DDR1-242ENST00000465966 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
DDR1-242ENST00000465966 KLHDC4Q8TBB5 520 aa10.61□□□□□ -0.71
DDR1-242ENST00000465966 CRISPLD2Q9H0B8 497 aa10.61□□□□□ -0.71
DDR1-242ENST00000465966 TRIM75PA6NK02 468 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 EYA2O00167 538 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 SEMA3EO15041 775 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 PRDX5P30044 214 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 RGS3P49796 1198 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 ZFPM1Q8IX07 1006 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 C7orf61Q8IZ16 206 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 DEFB123Q8N688 67 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 IDI2Q9BXS1 227 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.71
DDR1-242ENST00000465966 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
DDR1-242ENST00000465966 DENND2AQ9ULE3 1009 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 DDX19BQ9UMR2 479 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 AGTPBP1Q9UPW5 1226 aa10.6□□□□□ -0.71
DDR1-242ENST00000465966 HMGCRP04035 888 aa10.59□□□□□ -0.71
DDR1-242ENST00000465966 GCLCP48506 637 aaPredicted RBP10.59□□□□□ -0.71
DDR1-242ENST00000465966 PABPC4Q13310 644 aaKnown RBP eCLIP10.59□□□□□ -0.71
DDR1-242ENST00000465966 FAM110CQ1W6H9 321 aa10.59□□□□□ -0.71
DDR1-242ENST00000465966 GDF15Q99988 308 aa10.59□□□□□ -0.71
DDR1-242ENST00000465966 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
DDR1-242ENST00000465966 RPTORQ8N122 1335 aa10.58□□□□□ -0.71
DDR1-242ENST00000465966 SALL1Q9NSC2 1324 aa10.58□□□□□ -0.71
DDR1-242ENST00000465966 A0A1B0GUL6 1792 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 MAP3K10Q02779 954 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 ATP2B3Q16720 1220 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 LRIT3Q3SXY7 679 aa10.58□□□□□ -0.72
DDR1-242ENST00000465966 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms