RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 ACSBG1Q96GR2 724 aa10.21□□□□□ -0.77
SSB-207ENST00000465871 FAM8A1Q9UBU6 413 aa10.21□□□□□ -0.77
SSB-207ENST00000465871 PAGE1O75459 146 aa10.2□□□□□ -0.78
SSB-207ENST00000465871 LDHBP07195 334 aaKnown RBP10.2□□□□□ -0.78
SSB-207ENST00000465871 ERVK-24P63145 666 aa10.2□□□□□ -0.78
SSB-207ENST00000465871 CDK5R2Q13319 367 aa10.2□□□□□ -0.78
SSB-207ENST00000465871 CYP27C1Q4G0S4 372 aa10.2□□□□□ -0.78
SSB-207ENST00000465871 ZC3H7BQ9UGR2 993 aaKnown RBP10.2□□□□□ -0.78
SSB-207ENST00000465871 RNGTTO60942 597 aaKnown RBP10.19□□□□□ -0.78
SSB-207ENST00000465871 NEFMP07197 916 aa10.19□□□□□ -0.78
SSB-207ENST00000465871 BMP6P22004 513 aa10.19□□□□□ -0.78
SSB-207ENST00000465871 PCOLCE2Q9UKZ9 415 aa10.19□□□□□ -0.78
SSB-207ENST00000465871 TRIM37O94972 964 aa10.18□□□□□ -0.78
SSB-207ENST00000465871 USP17L7P0C7H9 530 aa10.18□□□□□ -0.78
SSB-207ENST00000465871 FAM87AP0C7U9 286 aa10.18□□□□□ -0.78
SSB-207ENST00000465871 NFXL1Q6ZNB6 911 aa10.18□□□□□ -0.78
SSB-207ENST00000465871 RNF214Q8ND24 703 aa10.18□□□□□ -0.78
SSB-207ENST00000465871 FBXL18Q96ME1 805 aa10.18□□□□□ -0.78
SSB-207ENST00000465871 FRMD6Q96NE9 622 aa10.18□□□□□ -0.78
SSB-207ENST00000465871 LLGL2Q6P1M3 1020 aa10.17□□□□□ -0.78
SSB-207ENST00000465871 MPRIPQ6WCQ1 1025 aa10.17□□□□□ -0.78
SSB-207ENST00000465871 GRIN3AQ8TCU5 1115 aa10.17□□□□□ -0.78
SSB-207ENST00000465871 ISL2Q96A47 359 aa10.17□□□□□ -0.78
SSB-207ENST00000465871 SCARA3Q6AZY7 606 aa10.16□□□□□ -0.78
SSB-207ENST00000465871 SND1Q7KZF4 910 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSB-207ENST00000465871 ABI1Q8IZP0 508 aa10.16□□□□□ -0.78
SSB-207ENST00000465871 ADGRE2Q9UHX3 823 aa10.16□□□□□ -0.78
SSB-207ENST00000465871 CELA3AP09093 270 aa10.15□□□□□ -0.78
SSB-207ENST00000465871 TAL1P17542 331 aaPredicted RBP10.15□□□□□ -0.78
SSB-207ENST00000465871 LRRC14Q15048 493 aa10.15□□□□□ -0.78
SSB-207ENST00000465871 KRTAP9-2Q9BYQ4 174 aa10.15□□□□□ -0.78
SSB-207ENST00000465871 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
SSB-207ENST00000465871 GNA15P30679 374 aa10.14□□□□□ -0.79
SSB-207ENST00000465871 COL19A1Q14993 1142 aa10.14□□□□□ -0.79
SSB-207ENST00000465871 RASIP1Q5U651 963 aa10.14□□□□□ -0.79
SSB-207ENST00000465871 PCNX4Q63HM2 1172 aa10.14□□□□□ -0.79
SSB-207ENST00000465871 FLCNQ8NFG4 579 aa10.14□□□□□ -0.79
SSB-207ENST00000465871 SSU72Q9NP77 194 aaKnown RBP10.14□□□□□ -0.79
SSB-207ENST00000465871 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.13□□□□□ -0.79
SSB-207ENST00000465871 TP53INP2Q8IXH6 220 aa10.13□□□□□ -0.79
SSB-207ENST00000465871 DUSP23Q9BVJ7 150 aa10.13□□□□□ -0.79
SSB-207ENST00000465871 CYP8B1Q9UNU6 501 aa10.13□□□□□ -0.79
SSB-207ENST00000465871 TTF2Q9UNY4 1162 aaKnown RBP10.13□□□□□ -0.79
SSB-207ENST00000465871 EIF4BP23588 611 aaKnown RBP10.12□□□□□ -0.79
SSB-207ENST00000465871 FGD1P98174 961 aa10.12□□□□□ -0.79
SSB-207ENST00000465871 PPM1JQ5JR12 505 aa10.12□□□□□ -0.79
SSB-207ENST00000465871 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.11□□□□□ -0.79
SSB-207ENST00000465871 DCDC2CA8MYV0 355 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 PAX4O43316 350 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 LEFTY1O75610 366 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 NTF4P34130 210 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 SV2BQ7L1I2 683 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 AEBP1Q8IUX7 1158 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 AGBL5Q8NDL9 886 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 PAK6Q9NQU5 681 aaPredicted RBP10.11□□□□□ -0.79
SSB-207ENST00000465871 PCDHA4Q9UN74 947 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 CSADQ9Y600 493 aa10.11□□□□□ -0.79
SSB-207ENST00000465871 ANKRD33BA6NCL7 494 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 PDIA4P13667 645 aaKnown RBP10.1□□□□□ -0.79
SSB-207ENST00000465871 RING1Q06587 406 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 STK11IPQ8N1F8 1099 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 TOP6BLQ8N6T0 577 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 FAM181AQ8N9Y4 354 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 BCL7CQ8WUZ0 217 aaPredicted RBP10.1□□□□□ -0.79
SSB-207ENST00000465871 MISP3Q96FF7 219 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 SLC5A6Q9Y289 635 aa10.1□□□□□ -0.79
SSB-207ENST00000465871 FANCGO15287 622 aa10.09□□□□□ -0.79
SSB-207ENST00000465871 EAPPQ56P03 285 aaPredicted RBP10.09□□□□□ -0.79
SSB-207ENST00000465871 ZBTB37Q5TC79 503 aa10.09□□□□□ -0.79
SSB-207ENST00000465871 C12orf40Q86WS4 652 aa10.09□□□□□ -0.79
SSB-207ENST00000465871 PLD6Q8N2A8 252 aaKnown RBP10.09□□□□□ -0.79
SSB-207ENST00000465871 NETO1Q8TDF5 533 aa10.09□□□□□ -0.79
SSB-207ENST00000465871 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
SSB-207ENST00000465871 KRTAP9-6A0A140TA67 174 aa10.08□□□□□ -0.8
SSB-207ENST00000465871 CBLL1Q75N03 491 aa10.08□□□□□ -0.8
SSB-207ENST00000465871 ELMO3Q96BJ8 720 aa10.08□□□□□ -0.8
SSB-207ENST00000465871 AK5Q9Y6K8 562 aa10.08□□□□□ -0.8
SSB-207ENST00000465871 U3KQE9 123 aa10.08□□□□□ -0.8
SSB-207ENST00000465871 WFDC3Q8IUB2 231 aa10.07□□□□□ -0.8
SSB-207ENST00000465871 GAL3ST3Q96A11 431 aa10.07□□□□□ -0.8
SSB-207ENST00000465871 DUSP9Q99956 384 aaKnown RBP10.07□□□□□ -0.8
SSB-207ENST00000465871 CEACAM5P06731 702 aa10.06□□□□□ -0.8
SSB-207ENST00000465871 TTBK2Q6IQ55 1244 aa10.06□□□□□ -0.8
SSB-207ENST00000465871 ARHGAP27Q6ZUM4 889 aa10.06□□□□□ -0.8
SSB-207ENST00000465871 UBE3DQ7Z6J8 389 aa10.06□□□□□ -0.8
SSB-207ENST00000465871 KCT2Q8NC54 265 aa10.06□□□□□ -0.8
SSB-207ENST00000465871 FMNL2Q96PY5 1086 aa10.06□□□□□ -0.8
SSB-207ENST00000465871 OXCT1P55809 520 aa10.05□□□□□ -0.8
SSB-207ENST00000465871 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
SSB-207ENST00000465871 LRFN4Q6PJG9 635 aa10.05□□□□□ -0.8
SSB-207ENST00000465871 ZNF574Q6ZN55 896 aaPredicted RBP10.05□□□□□ -0.8
SSB-207ENST00000465871 PRDM10Q9NQV6 1147 aa10.05□□□□□ -0.8
SSB-207ENST00000465871 RNF19AQ9NV58 838 aa10.05□□□□□ -0.8
SSB-207ENST00000465871 RPS26P62854 115 aaKnown RBP10.04□□□□□ -0.8
SSB-207ENST00000465871 PTPN11Q06124 597 aaPredicted RBP10.04□□□□□ -0.8
SSB-207ENST00000465871 INPP5AQ14642 412 aa10.04□□□□□ -0.8
SSB-207ENST00000465871 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
SSB-207ENST00000465871 CDC37L1Q7L3B6 337 aa10.04□□□□□ -0.8
SSB-207ENST00000465871 NPAS4Q8IUM7 802 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms