RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 BRMS1Q9HCU9 246 aa6.46□□□□□ -1.37
CDK13-203ENST00000465643 STRIP2Q9ULQ0 834 aa6.46□□□□□ -1.37
CDK13-203ENST00000465643 RRBP1Q9P2E9 1410 aaKnown RBP6.46□□□□□ -1.38
CDK13-203ENST00000465643 ZNF518AQ6AHZ1 1483 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 CCDC141Q6ZP82 1450 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 NCLP19338 710 aaKnown RBP6.46□□□□□ -1.38
CDK13-203ENST00000465643 CLCQ05315 142 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 PCDH1Q08174 1060 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 COL9A2Q14055 689 aaPredicted RBP6.46□□□□□ -1.38
CDK13-203ENST00000465643 GK5Q6ZS86 529 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 FAM35AQ86V20 835 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 BSNDQ8WZ55 320 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 RNPC3Q96LT9 517 aaKnown RBP6.46□□□□□ -1.38
CDK13-203ENST00000465643 DEPDC7Q96QD5 511 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 MIR1-1HGQ9H1L0 117 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 EFCC1Q9HA90 598 aa6.46□□□□□ -1.38
CDK13-203ENST00000465643 SH2B1Q9NRF2 756 aaPredicted RBP6.46□□□□□ -1.38
CDK13-203ENST00000465643 CDC14CA4D256 554 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 CDK8P49336 464 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 RPS26P11Q5JNZ5 115 aaPredicted RBP6.45□□□□□ -1.38
CDK13-203ENST00000465643 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
CDK13-203ENST00000465643 CBX8Q9HC52 389 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 SIRPGQ9P1W8 387 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 MBD5Q9P267 1494 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 PERM1Q5SV97 790 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 FAM182BQ5T319 152 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 HGSNATQ68CP4 663 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 MICAL1Q8TDZ2 1067 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 TNKS2Q9H2K2 1166 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 KLF15Q9UIH9 416 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 DAPK1P53355 1430 aa6.45□□□□□ -1.38
CDK13-203ENST00000465643 ARHGEF5Q12774 1597 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 U2SURPO15042 1029 aaKnown RBP6.44□□□□□ -1.38
CDK13-203ENST00000465643 B3GALT4O96024 378 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 LMNB1P20700 586 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 CDC25BP30305 580 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 SULF2Q8IWU5 870 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 FERD3LQ96RJ6 166 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 SMG9Q9H0W8 520 aaKnown RBP6.44□□□□□ -1.38
CDK13-203ENST00000465643 SOX13Q9UN79 622 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 ABCC5O15440 1437 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 FRMPD1Q5SYB0 1578 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 RICTORQ6R327 1708 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 CILPO75339 1184 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 SMNDC1O75940 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDK13-203ENST00000465643 NME2P22392 152 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 REC114Q7Z4M0 266 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 VWA5B2Q8N398 1253 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 MKL1Q969V6 931 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 LRRC3Q9BY71 257 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 R3HCC1Q9Y3T6 440 aaKnown RBP6.44□□□□□ -1.38
CDK13-203ENST00000465643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDK13-203ENST00000465643 C9orf84Q5VXU9 1444 aa6.44□□□□□ -1.38
CDK13-203ENST00000465643 DNMT1P26358 1616 aaKnown RBP6.44□□□□□ -1.38
CDK13-203ENST00000465643 NRG2O14511 850 aaPredicted RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 GIPRP48546 466 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 PPP2R3AQ06190 1150 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 NEUROD1Q13562 356 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 MPP2Q14168 576 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 ZNF468Q5VIY5 522 aaPredicted RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 RUFY4Q6ZNE9 571 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 ANKRD13AQ8IZ07 590 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 SLC6A14Q9UN76 642 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 ZFYVE16Q7Z3T8 1539 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 ESRRAP11474 423 aaPredicted RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 SNRPBP14678 240 aaKnown RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 CWF19L2Q2TBE0 894 aaKnown RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 LILRB2Q8N423 598 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 ZC3H12CQ9C0D7 883 aaKnown RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 ANTXR1Q9H6X2 564 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 RRP7BPQ9NSQ0 103 aa6.43□□□□□ -1.38
CDK13-203ENST00000465643 POLR3KQ9Y2Y1 108 aaPredicted RBP6.43□□□□□ -1.38
CDK13-203ENST00000465643 KDM5CP41229 1560 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 HECW2Q9P2P5 1572 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 ATP7AQ04656 1500 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 TRIM37O94972 964 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 EPHA1P21709 976 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 GDF6Q6KF10 455 aaPredicted RBP6.42□□□□□ -1.38
CDK13-203ENST00000465643 LLGL2Q6P1M3 1020 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 MICALL1Q8N3F8 863 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 DNAJC7Q99615 494 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 RBSNQ9H1K0 784 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 GMPR2Q9P2T1 348 aaKnown RBP6.42□□□□□ -1.38
CDK13-203ENST00000465643 ZMYM4Q5VZL5 1548 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 MLH3Q9UHC1 1453 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 YEATS2Q9ULM3 1422 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 ANKRD30AQ9BXX3 1397 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 ROBO2Q9HCK4 1378 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 ARID4BQ4LE39 1312 aaPredicted RBP6.42□□□□□ -1.38
CDK13-203ENST00000465643 CROCC2H7BZ55 1655 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 SELPP16109 830 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 MAP1SQ66K74 1059 aaPredicted RBP6.42□□□□□ -1.38
CDK13-203ENST00000465643 LSRQ86X29 649 aaPredicted RBP6.42□□□□□ -1.38
CDK13-203ENST00000465643 LPIN3Q9BQK8 851 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 CYP8B1Q9UNU6 501 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 PHF24Q9UPV7 400 aa6.42□□□□□ -1.38
CDK13-203ENST00000465643 PCDHB14Q9Y5E9 798 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms